RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 PXDNLA1KZ92 1463 aa8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 KCPQ6ZWJ8 1503 aa8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
CUBNP3-201ENST00000457461 BCL9LQ86UU0 1499 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 ERVV-2B6SEH9 535 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 KCNQ3O43525 872 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 CASQ1P31415 396 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 CD151P48509 253 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 CHAF1AQ13111 956 aaPredicted RBP8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 CDC37Q16543 378 aaPredicted RBP8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 ERCC4Q92889 916 aaPredicted RBP8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 CXorf56Q9H5V9 222 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 DDX19BQ9UMR2 479 aa8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 THRAP3Q9Y2W1 955 aaKnown RBP8.15□□□□□ -1.11
CUBNP3-201ENST00000457461 SPATA31A1Q5TZJ5 1347 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 DOT1LQ8TEK3 1739 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 CCDC30Q5VVM6 783 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 CHMP4CQ96CF2 233 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 NUCKS1Q9H1E3 243 aaKnown RBP8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 RSPH14Q9UHP6 348 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 SPATA31A5Q5VU36 1347 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 SPATA31A7Q8IWB4 1347 aa8.14□□□□□ -1.11
CUBNP3-201ENST00000457461 CICQ96RK0 1608 aaPredicted RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 MPHOSPH10O00566 681 aaKnown RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 EIF3JO75822 258 aaKnown RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 INTS3Q68E01 1043 aaKnown RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 ZNF790Q6PG37 636 aa8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 ZNF513Q8N8E2 541 aaPredicted RBP8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 ZBTB40Q9NUA8 1239 aa8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 SUFUQ9UMX1 484 aa8.13□□□□□ -1.11
CUBNP3-201ENST00000457461 ERCC3P19447 782 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 BARGINQ6ZT62 677 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 CENPQQ7L2Z9 268 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 CEP89Q96ST8 783 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 SUDS3Q9H7L9 328 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 FAM53CQ9NYF3 392 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 ANKRD18BA2A2Z9 1011 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 ZBTB7BO15156 539 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 CTIFO43310 598 aaKnown RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 HDGFL1Q5TGJ6 251 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 EP400NLQ6ZTU2 488 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 G2E3Q7L622 706 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 FAM177A1Q8N128 213 aaPredicted RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 STK31Q9BXU1 1019 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 DEF6Q9H4E7 631 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 CHMP5Q9NZZ3 219 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 DDX41Q9UJV9 622 aaKnown RBP8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 PCDHB15Q9Y5E8 787 aa8.12□□□□□ -1.11
CUBNP3-201ENST00000457461 ATP2B1P20020 1258 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 IRX1P78414 480 aaPredicted RBP8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 SARNPP82979 210 aaKnown RBP8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 FLIIQ13045 1269 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 RABEP1Q15276 862 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 ZRSR2Q15696 482 aaKnown RBP8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 UNC5CLQ8IV45 518 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 DIAPH3Q9NSV4 1193 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 JRKLQ9Y4A0 524 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 KAT6BQ8WYB5 2073 aa8.11□□□□□ -1.11
CUBNP3-201ENST00000457461 NUTM2BA6NNL0 878 aaPredicted RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 NUTM2EB1AL46 878 aaPredicted RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 CABP4P57796 275 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 VPS72Q15906 364 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 C8orf34Q49A92 452 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 NUTM2AQ8IVF1 878 aaPredicted RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 ZNF496Q96IT1 587 aaPredicted RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 CIZ1Q9ULV3 898 aaPredicted RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 BCL9O00512 1426 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 ATP10DQ9P241 1426 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 NUP188Q5SRE5 1749 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 IGHDP01880 384 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 TPM3P06753 285 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 CYP2C19P33261 490 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 HSPA1LP34931 641 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 SLC39A6Q13433 755 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 JAKMIP3Q5VZ66 844 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 FMNL2Q96PY5 1086 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
CUBNP3-201ENST00000457461 DBF4Q9UBU7 674 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms