RNA–Protein interactions for RNA: ENST00000456682.1

KCMF1-204, Transcript of potassium channel modulatory factor 1, human

TSL 3

Gene KCMF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCMF1-204	ENST00000456682	SBF1	O95248	1867 aa		33.21	■■■□□ 2.91
KCMF1-204	ENST00000456682	CCDC152	Q4G0S7	254 aa		33.21	■■■□□ 2.91
KCMF1-204	ENST00000456682	OLFM4	Q6UX06	510 aa		33.21	■■■□□ 2.91
KCMF1-204	ENST00000456682	RTKN2	Q8IZC4	609 aa		33.21	■■■□□ 2.91
KCMF1-204	ENST00000456682	LMNB1	P20700	586 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	GRIPAP1	Q4V328	841 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	C9orf131	Q5VYM1	1079 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	ARHGAP45	Q92619	1136 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	ATP6V0A2	Q9Y487	856 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	KIF16B	Q96L93	1317 aa		33.2	■■■□□ 2.91
KCMF1-204	ENST00000456682	API5	Q9BZZ5	524 aa	Known RBP	33.19	■■■□□ 2.9
KCMF1-204	ENST00000456682	TAOK3	Q9H2K8	898 aa		33.19	■■■□□ 2.9
KCMF1-204	ENST00000456682	GRM8	O00222	908 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	PRELP	P51888	382 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	CTSW	P56202	376 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	TMC4	Q7Z404	712 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	SP8	Q8IXZ3	490 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	TTLL11	Q8NHH1	800 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	SNED1	Q8TER0	1413 aa		33.18	■■■□□ 2.9
KCMF1-204	ENST00000456682	BCAR3	O75815	825 aa		33.17	■■■□□ 2.9
KCMF1-204	ENST00000456682	CELF1	Q92879	486 aa	Known RBP	33.17	■■■□□ 2.9
KCMF1-204	ENST00000456682	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.17	■■■□□ 2.9
KCMF1-204	ENST00000456682	RNF181	Q9P0P0	153 aa		33.17	■■■□□ 2.9
KCMF1-204	ENST00000456682	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
KCMF1-204	ENST00000456682	TAF1	P21675	1872 aa		33.16	■■■□□ 2.9
KCMF1-204	ENST00000456682	RPS8	P62241	208 aa	Known RBP	33.15	■■■□□ 2.9
KCMF1-204	ENST00000456682	TMX4	Q9H1E5	349 aa	Predicted RBP	33.15	■■■□□ 2.9
KCMF1-204	ENST00000456682	SEC31B	Q9NQW1	1179 aa		33.15	■■■□□ 2.9
KCMF1-204	ENST00000456682	MYH3	P11055	1940 aa		33.14	■■■□□ 2.9
KCMF1-204	ENST00000456682	CSF1R	P07333	972 aa		33.14	■■■□□ 2.9
KCMF1-204	ENST00000456682	RTL9	Q8NET4	1388 aa		33.13	■■■□□ 2.89
KCMF1-204	ENST00000456682	UTY	O14607	1347 aa		33.13	■■■□□ 2.89
KCMF1-204	ENST00000456682	IPO8	O15397	1037 aa	Known RBP	33.13	■■■□□ 2.89
KCMF1-204	ENST00000456682	PSMD1	Q99460	953 aa		33.13	■■■□□ 2.89
KCMF1-204	ENST00000456682	SLC51A	Q86UW1	340 aa		33.12	■■■□□ 2.89
KCMF1-204	ENST00000456682	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.12	■■■□□ 2.89
KCMF1-204	ENST00000456682	CCDC88A	Q3V6T2	1871 aa		33.12	■■■□□ 2.89
KCMF1-204	ENST00000456682	CCT4	P50991	539 aa	Known RBP	33.11	■■■□□ 2.89
KCMF1-204	ENST00000456682	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.11	■■■□□ 2.89
KCMF1-204	ENST00000456682	FOXO4	P98177	505 aa		33.1	■■■□□ 2.89
KCMF1-204	ENST00000456682	GREM2	Q9H772	168 aa		33.1	■■■□□ 2.89
KCMF1-204	ENST00000456682	COL4A1	P02462	1669 aa		33.1	■■■□□ 2.89
KCMF1-204	ENST00000456682	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.09	■■■□□ 2.89
KCMF1-204	ENST00000456682	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.08	■■■□□ 2.89
KCMF1-204	ENST00000456682	USP44	Q9H0E7	712 aa		33.08	■■■□□ 2.89
KCMF1-204	ENST00000456682	ATF7IP	Q6VMQ6	1270 aa		33.07	■■■□□ 2.88
KCMF1-204	ENST00000456682	FRAT1	Q92837	279 aa	Predicted RBP	33.07	■■■□□ 2.88
KCMF1-204	ENST00000456682	CDC5L	Q99459	802 aa	Known RBP	33.07	■■■□□ 2.88
KCMF1-204	ENST00000456682	DICER1	Q9UPY3	1922 aa	Known RBP	33.06	■■■□□ 2.88
KCMF1-204	ENST00000456682	ANKRD18A	Q8IVF6	992 aa		33.06	■■■□□ 2.88
KCMF1-204	ENST00000456682	MPND	Q8N594	471 aa		33.06	■■■□□ 2.88
KCMF1-204	ENST00000456682	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.06	■■■□□ 2.88
KCMF1-204	ENST00000456682	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.06	■■■□□ 2.88
KCMF1-204	ENST00000456682	LRRC37A	A6NMS7	1700 aa		33.05	■■■□□ 2.88
KCMF1-204	ENST00000456682	TRIM27	P14373	513 aa		33.05	■■■□□ 2.88
KCMF1-204	ENST00000456682	EPHA10	Q5JZY3	1008 aa		33.05	■■■□□ 2.88
KCMF1-204	ENST00000456682	ZKSCAN2	Q63HK3	967 aa		33.04	■■■□□ 2.88
KCMF1-204	ENST00000456682	INTS3	Q68E01	1043 aa	Known RBP	33.04	■■■□□ 2.88
KCMF1-204	ENST00000456682	DPP8	Q6V1X1	898 aa	Predicted RBP	33.04	■■■□□ 2.88
KCMF1-204	ENST00000456682	KAZALD1	Q96I82	304 aa		33.04	■■■□□ 2.88
KCMF1-204	ENST00000456682	SUCLG2	Q96I99	432 aa		33.04	■■■□□ 2.88
KCMF1-204	ENST00000456682	ITGA6	P23229	1130 aa		33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	IARS	P41252	1262 aa	Known RBP	33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	FAM161A	Q3B820	660 aa		33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	LMBR1L	Q6UX01	489 aa		33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	SUPT20H	Q8NEM7	779 aa		33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	VPS33B	Q9H267	617 aa		33.03	■■■□□ 2.88
KCMF1-204	ENST00000456682	BSDC1	Q9NW68	430 aa	Predicted RBP	33.01	■■■□□ 2.87
KCMF1-204	ENST00000456682	NSFL1C	Q9UNZ2	370 aa	Known RBP	33	■■■□□ 2.87
KCMF1-204	ENST00000456682	ANKRD18B	A2A2Z9	1011 aa		32.99	■■■□□ 2.87
KCMF1-204	ENST00000456682	TNN	Q9UQP3	1299 aa		32.99	■■■□□ 2.87
KCMF1-204	ENST00000456682	IGHMBP2	P38935	993 aa	Known RBP	32.98	■■■□□ 2.87
KCMF1-204	ENST00000456682	GPSM2	P81274	684 aa		32.98	■■■□□ 2.87
KCMF1-204	ENST00000456682	IFIT5	Q13325	482 aa	Known RBP	32.98	■■■□□ 2.87
KCMF1-204	ENST00000456682	TIAM2	Q8IVF5	1701 aa		32.98	■■■□□ 2.87
KCMF1-204	ENST00000456682	PODXL2	Q9NZ53	605 aa		32.98	■■■□□ 2.87
KCMF1-204	ENST00000456682	RABL6	Q3YEC7	729 aa	Predicted RBP	32.97	■■■□□ 2.87
KCMF1-204	ENST00000456682	CHMP3	Q9Y3E7	222 aa		32.97	■■■□□ 2.87
KCMF1-204	ENST00000456682	CLUAP1	Q96AJ1	413 aa		32.96	■■■□□ 2.87
KCMF1-204	ENST00000456682	BICC1	Q9H694	974 aa	Known RBP	32.96	■■■□□ 2.87
KCMF1-204	ENST00000456682	CCDC57	Q2TAC2	916 aa		32.95	■■■□□ 2.87
KCMF1-204	ENST00000456682	JDP2	Q8WYK2	163 aa		32.95	■■■□□ 2.87
KCMF1-204	ENST00000456682	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.95	■■■□□ 2.87
KCMF1-204	ENST00000456682	MINPP1	Q9UNW1	487 aa		32.95	■■■□□ 2.87
KCMF1-204	ENST00000456682	DUOX1	Q9NRD9	1551 aa		32.95	■■■□□ 2.86
KCMF1-204	ENST00000456682	GLTPD2	A6NH11	291 aa		32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	LARGE2	Q8N3Y3	721 aa		32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	ANKRD44	Q8N8A2	993 aa		32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	ZNF526	Q8TF50	670 aa	Predicted RBP	32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	YTHDC1	Q96MU7	727 aa	Known RBP	32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	RCAN3	Q9UKA8	241 aa		32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	HDAC5	Q9UQL6	1122 aa		32.94	■■■□□ 2.86
KCMF1-204	ENST00000456682	PPIP5K2	O43314	1243 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	UBTFL1	P0CB47	393 aa	Predicted RBP	32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	KIAA2012	Q0VF49	1180 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	DPY19L2	Q6NUT2	758 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	MPHOSPH8	Q99549	860 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	POLL	Q9UGP5	575 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	LTBP1	Q14766	1721 aa		32.93	■■■□□ 2.86
KCMF1-204	ENST00000456682	FZD9	O00144	591 aa		32.92	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms