RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 GRAPQ13588 217 aa16.23■□□□□ 0.19
TRA2B-206ENST00000456380 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
TRA2B-206ENST00000456380 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-206ENST00000456380 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
TRA2B-206ENST00000456380 GRAPLQ8TC17 118 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-206ENST00000456380 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
TRA2B-206ENST00000456380 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-206ENST00000456380 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
TRA2B-206ENST00000456380 RAD17O75943 681 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 ECE1P42892 770 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 GRM1Q13255 1194 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 CIAPIN1Q6FI81 312 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
TRA2B-206ENST00000456380 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.19
TRA2B-206ENST00000456380 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
TRA2B-206ENST00000456380 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
TRA2B-206ENST00000456380 YDJCA8MPS7 323 aa16.21■□□□□ 0.18
TRA2B-206ENST00000456380 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.18
TRA2B-206ENST00000456380 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
TRA2B-206ENST00000456380 TNIP1Q15025 636 aa16.2■□□□□ 0.18
TRA2B-206ENST00000456380 SAPCD2Q86UD0 394 aa16.2■□□□□ 0.18
TRA2B-206ENST00000456380 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
TRA2B-206ENST00000456380 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
TRA2B-206ENST00000456380 LAMB2P55268 1798 aa16.2■□□□□ 0.18
TRA2B-206ENST00000456380 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
TRA2B-206ENST00000456380 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
TRA2B-206ENST00000456380 AOC2O75106 756 aa16.19■□□□□ 0.18
TRA2B-206ENST00000456380 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
TRA2B-206ENST00000456380 ANKRD36CQ5JPF3 1778 aa16.19■□□□□ 0.18
TRA2B-206ENST00000456380 MAP2K2P36507 400 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
TRA2B-206ENST00000456380 FAM89AQ96GI7 184 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 CNOT7Q9UIV1 285 aaKnown RBP16.18■□□□□ 0.18
TRA2B-206ENST00000456380 TRPM7Q96QT4 1865 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 THSD7BQ9C0I4 1608 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
TRA2B-206ENST00000456380 DUOX1Q9NRD9 1551 aa16.18■□□□□ 0.18
TRA2B-206ENST00000456380 TAF1P21675 1872 aa16.17■□□□□ 0.18
TRA2B-206ENST00000456380 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
TRA2B-206ENST00000456380 SF3B3Q15393 1217 aaKnown RBP16.17■□□□□ 0.18
TRA2B-206ENST00000456380 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
TRA2B-206ENST00000456380 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-206ENST00000456380 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
TRA2B-206ENST00000456380 HOXB7P09629 217 aa16.16■□□□□ 0.18
TRA2B-206ENST00000456380 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
TRA2B-206ENST00000456380 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
TRA2B-206ENST00000456380 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
TRA2B-206ENST00000456380 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
TRA2B-206ENST00000456380 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
TRA2B-206ENST00000456380 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
TRA2B-206ENST00000456380 H7C1D1 291 aa16.15■□□□□ 0.18
TRA2B-206ENST00000456380 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
TRA2B-206ENST00000456380 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
TRA2B-206ENST00000456380 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
TRA2B-206ENST00000456380 ADAMTS8Q9UP79 889 aa16.15■□□□□ 0.18
TRA2B-206ENST00000456380 PSMD14O00487 310 aa16.14■□□□□ 0.18
TRA2B-206ENST00000456380 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.18
TRA2B-206ENST00000456380 DLK2Q6UY11 383 aa16.14■□□□□ 0.18
TRA2B-206ENST00000456380 DPF2Q92785 391 aa16.14■□□□□ 0.18
TRA2B-206ENST00000456380 DBNDD1Q9H9R9 158 aa16.14■□□□□ 0.18
TRA2B-206ENST00000456380 POLLQ9UGP5 575 aa16.14■□□□□ 0.18
TRA2B-206ENST00000456380 RIMBP2O15034 1052 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 GPSM2P81274 684 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 USP48Q86UV5 1035 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 HYPKQ9NX55 129 aa16.14■□□□□ 0.17
TRA2B-206ENST00000456380 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
TRA2B-206ENST00000456380 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
TRA2B-206ENST00000456380 C6orf229H3BNL8 230 aa16.13■□□□□ 0.17
TRA2B-206ENST00000456380 EGFRP00533 1210 aa16.13■□□□□ 0.17
TRA2B-206ENST00000456380 TRIM28Q13263 835 aaKnown RBP16.13■□□□□ 0.17
TRA2B-206ENST00000456380 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRA2B-206ENST00000456380 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
TRA2B-206ENST00000456380 COL4A1P02462 1669 aa16.13■□□□□ 0.17
TRA2B-206ENST00000456380 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
TRA2B-206ENST00000456380 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
TRA2B-206ENST00000456380 RPS8P62241 208 aaKnown RBP16.11■□□□□ 0.17
TRA2B-206ENST00000456380 DOK7Q18PE1 504 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 TBC1D10BQ4KMP7 808 aaPredicted RBP16.11■□□□□ 0.17
TRA2B-206ENST00000456380 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 CA12O43570 354 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 ECE2O60344 883 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
TRA2B-206ENST00000456380 ZNF853P0CG23 659 aa16.1■□□□□ 0.17
TRA2B-206ENST00000456380 HUNKP57058 714 aa16.1■□□□□ 0.17
TRA2B-206ENST00000456380 CCDC85CA6NKD9 419 aa16.09■□□□□ 0.17
TRA2B-206ENST00000456380 RPS12P25398 132 aaKnown RBP16.09■□□□□ 0.17
TRA2B-206ENST00000456380 RBM26Q5T8P6 1007 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms