RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 RIC3Q7Z5B4 369 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 SPC24Q8NBT2 197 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 TNMDQ9H2S6 317 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 DACT1Q9NYF0 836 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 CHMP3Q9Y3E7 222 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 C5P01031 1676 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 KRT32Q14532 448 aa20.97■□□□□ 0.95
PTPN6-204ENST00000456013 LEO1Q8WVC0 666 aaPredicted RBP20.97■□□□□ 0.95
PTPN6-204ENST00000456013 GOLGA6L4A6NEF3 574 aa20.96■□□□□ 0.95
PTPN6-204ENST00000456013 NEURL1BA8MQ27 555 aa20.96■□□□□ 0.95
PTPN6-204ENST00000456013 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
PTPN6-204ENST00000456013 KLHDC4Q8TBB5 520 aa20.96■□□□□ 0.95
PTPN6-204ENST00000456013 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
PTPN6-204ENST00000456013 GCKRQ14397 625 aa20.95■□□□□ 0.94
PTPN6-204ENST00000456013 ZNF710Q8N1W2 664 aa20.95■□□□□ 0.94
PTPN6-204ENST00000456013 JARID2Q92833 1246 aaPredicted RBP20.95■□□□□ 0.94
PTPN6-204ENST00000456013 CLSTN2Q9H4D0 955 aa20.95■□□□□ 0.94
PTPN6-204ENST00000456013 TFIP11Q9UBB9 837 aaKnown RBP20.95■□□□□ 0.94
PTPN6-204ENST00000456013 ATP5JP18859 108 aa20.95■□□□□ 0.94
PTPN6-204ENST00000456013 LUZP1Q86V48 1076 aa20.95■□□□□ 0.94
PTPN6-204ENST00000456013 CCDC94Q9BW85 323 aaPredicted RBP20.95■□□□□ 0.94
PTPN6-204ENST00000456013 RFX7Q2KHR2 1363 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 STK3Q13188 491 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 GTF3C6Q969F1 213 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 CBX8Q9HC52 389 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 COPRSQ9NQ92 184 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 ANO6Q4KMQ2 910 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 EPHA10Q5JZY3 1008 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 CKAP2LQ8IYA6 745 aa20.94■□□□□ 0.94
PTPN6-204ENST00000456013 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
PTPN6-204ENST00000456013 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
PTPN6-204ENST00000456013 RGPD5Q99666 1765 aa20.93■□□□□ 0.94
PTPN6-204ENST00000456013 COL15A1P39059 1388 aa20.93■□□□□ 0.94
PTPN6-204ENST00000456013 ZNF790Q6PG37 636 aa20.93■□□□□ 0.94
PTPN6-204ENST00000456013 TSC1Q92574 1164 aa20.93■□□□□ 0.94
PTPN6-204ENST00000456013 EDC3Q96F86 508 aaKnown RBP20.93■□□□□ 0.94
PTPN6-204ENST00000456013 NEK1Q96PY6 1258 aa20.93■□□□□ 0.94
PTPN6-204ENST00000456013 MYH15Q9Y2K3 1946 aa20.92■□□□□ 0.94
PTPN6-204ENST00000456013 PTGS1P23219 599 aa20.92■□□□□ 0.94
PTPN6-204ENST00000456013 CHAF1AQ13111 956 aaPredicted RBP20.92■□□□□ 0.94
PTPN6-204ENST00000456013 RESTQ13127 1097 aa20.92■□□□□ 0.94
PTPN6-204ENST00000456013 TDRD7Q8NHU6 1098 aaKnown RBP20.92■□□□□ 0.94
PTPN6-204ENST00000456013 PGBD1Q96JS3 809 aa20.92■□□□□ 0.94
PTPN6-204ENST00000456013 DBNLQ9UJU6 430 aaKnown RBP20.92■□□□□ 0.94
PTPN6-204ENST00000456013 TNNI3KQ59H18 835 aa20.91■□□□□ 0.94
PTPN6-204ENST00000456013 XAGE3Q8WTP9 111 aa20.91■□□□□ 0.94
PTPN6-204ENST00000456013 MYD88Q99836 296 aa20.91■□□□□ 0.94
PTPN6-204ENST00000456013 FPGT-TNNI3KV9GXZ4 949 aa20.91■□□□□ 0.94
PTPN6-204ENST00000456013 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
PTPN6-204ENST00000456013 JAK2O60674 1132 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 RFX5P48382 616 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-204ENST00000456013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-204ENST00000456013 SMAP1Q8IYB5 467 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-204ENST00000456013 AXIN2Q9Y2T1 843 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-204ENST00000456013 NR1I2O75469 434 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 MYL6BP14649 208 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 COPS6Q7L5N1 327 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 BRF1Q92994 677 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 ZSCAN16Q9H4T2 348 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-204ENST00000456013 LAMA4Q16363 1823 aa20.9■□□□□ 0.94
PTPN6-204ENST00000456013 ZNF609O15014 1411 aa20.89■□□□□ 0.94
PTPN6-204ENST00000456013 PTPN12Q05209 780 aaKnown RBP20.89■□□□□ 0.94
PTPN6-204ENST00000456013 Q6ZUG5 572 aa20.89■□□□□ 0.94
PTPN6-204ENST00000456013 BICD2Q8TD16 824 aa20.89■□□□□ 0.94
PTPN6-204ENST00000456013 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.94
PTPN6-204ENST00000456013 SLC39A6Q13433 755 aa20.89■□□□□ 0.93
PTPN6-204ENST00000456013 ANKLE2Q86XL3 938 aa20.89■□□□□ 0.93
PTPN6-204ENST00000456013 ARID3AQ99856 593 aa20.89■□□□□ 0.93
PTPN6-204ENST00000456013 SLC52A2Q9HAB3 445 aa20.89■□□□□ 0.93
PTPN6-204ENST00000456013 TRPM3Q9HCF6 1732 aaPredicted RBP20.88■□□□□ 0.93
PTPN6-204ENST00000456013 ZNF75DP51815 510 aa20.88■□□□□ 0.93
PTPN6-204ENST00000456013 CCDC186Q7Z3E2 898 aa20.88■□□□□ 0.93
PTPN6-204ENST00000456013 RIOK3O14730 519 aaKnown RBP20.88■□□□□ 0.93
PTPN6-204ENST00000456013 CAVIN2O95810 425 aa20.88■□□□□ 0.93
PTPN6-204ENST00000456013 TFCP2Q12800 502 aa20.88■□□□□ 0.93
PTPN6-204ENST00000456013 CFAP45Q9UL16 551 aa20.88■□□□□ 0.93
PTPN6-204ENST00000456013 RABL6Q3YEC7 729 aaPredicted RBP20.87■□□□□ 0.93
PTPN6-204ENST00000456013 MCMDC2Q4G0Z9 681 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 TRIM5Q9C035 493 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 H3BQV1 296 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 CYP21A2P08686 494 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 ZNF165P49910 485 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 IFFO2Q5TF58 517 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 ANKRD13DQ6ZTN6 518 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 ORAI2Q96SN7 254 aa20.87■□□□□ 0.93
PTPN6-204ENST00000456013 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
PTPN6-204ENST00000456013 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
PTPN6-204ENST00000456013 HAUS7Q99871 368 aa20.86■□□□□ 0.93
PTPN6-204ENST00000456013 LLPHQ9BRT6 129 aaKnown RBP20.86■□□□□ 0.93
PTPN6-204ENST00000456013 CCDC129Q6ZRS4 1044 aa20.86■□□□□ 0.93
PTPN6-204ENST00000456013 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
PTPN6-204ENST00000456013 DRC7Q8IY82 874 aa20.86■□□□□ 0.93
PTPN6-204ENST00000456013 DNAJC25Q9H1X3 360 aa20.85■□□□□ 0.93
PTPN6-204ENST00000456013 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
PTPN6-204ENST00000456013 ERBB3P21860 1342 aa20.85■□□□□ 0.93
PTPN6-204ENST00000456013 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms