RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 GJA3Q9Y6H8 435 aa23.98■■□□□ 1.43
UBE2D4-208ENST00000454350 CCDC27Q2M243 656 aa23.97■■□□□ 1.43
UBE2D4-208ENST00000454350 PNMA8AQ86V59 439 aaPredicted RBP23.97■■□□□ 1.43
UBE2D4-208ENST00000454350 NIM1KQ8IY84 436 aa23.97■■□□□ 1.43
UBE2D4-208ENST00000454350 MPNDQ8N594 471 aa23.97■■□□□ 1.43
UBE2D4-208ENST00000454350 EPS15P42566 896 aa23.96■■□□□ 1.43
UBE2D4-208ENST00000454350 DPP8Q6V1X1 898 aaPredicted RBP23.96■■□□□ 1.43
UBE2D4-208ENST00000454350 CELF1Q92879 486 aaKnown RBP23.96■■□□□ 1.43
UBE2D4-208ENST00000454350 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
UBE2D4-208ENST00000454350 ZEB1P37275 1124 aaPredicted RBP23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 CXCL9Q07325 125 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 KIAA2012Q0VF49 1180 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 RIC3Q7Z5B4 369 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 WWC1Q8IX03 1113 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 SUPT20HQ8NEM7 779 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 TSR2Q969E8 191 aaKnown RBP23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 TMX4Q9H1E5 349 aaPredicted RBP23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 TRPM7Q96QT4 1865 aa23.95■■□□□ 1.42
UBE2D4-208ENST00000454350 IRS4O14654 1257 aaPredicted RBP23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 GOLGA2Q08379 1002 aa23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 MAP1SQ66K74 1059 aaPredicted RBP23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 TMC4Q7Z404 712 aa23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 ZBTB38Q8NAP3 1195 aaPredicted RBP23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 ZNRF3Q9ULT6 936 aa23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 MYH3P11055 1940 aa23.94■■□□□ 1.42
UBE2D4-208ENST00000454350 CNTROBQ8N137 903 aa23.93■■□□□ 1.42
UBE2D4-208ENST00000454350 CLEC11AQ9Y240 323 aa23.93■■□□□ 1.42
UBE2D4-208ENST00000454350 CCDC30Q5VVM6 783 aa23.92■■□□□ 1.42
UBE2D4-208ENST00000454350 MYD88Q99836 296 aa23.92■■□□□ 1.42
UBE2D4-208ENST00000454350 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 YDJCA8MPS7 323 aa23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 NCBP3Q53F19 620 aaKnown RBP23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 CCDC191Q8NCU4 936 aa23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 METTL22Q9BUU2 404 aaPredicted RBP23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 GPRC5DQ9NZD1 345 aa23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 MKRN1Q9UHC7 482 aaKnown RBP23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 SCN9AQ15858 1988 aa23.91■■□□□ 1.42
UBE2D4-208ENST00000454350 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
UBE2D4-208ENST00000454350 LMOD1P29536 600 aaPredicted RBP23.9■■□□□ 1.42
UBE2D4-208ENST00000454350 TMEM88BA6NKF7 163 aa23.89■■□□□ 1.41
UBE2D4-208ENST00000454350 PCCAP05165 728 aaPredicted RBP23.89■■□□□ 1.41
UBE2D4-208ENST00000454350 IL16Q14005 1332 aa23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 GPSM2P81274 684 aa23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 USP50Q70EL3 339 aaPredicted RBP23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 JARID2Q92833 1246 aaPredicted RBP23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 SEC31BQ9NQW1 1179 aa23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 POLLQ9UGP5 575 aa23.88■■□□□ 1.41
UBE2D4-208ENST00000454350 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 GMPSP49915 693 aaPredicted RBP23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 RPS8P62241 208 aaKnown RBP23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 CIAPIN1Q6FI81 312 aa23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 MAP3K2Q9Y2U5 619 aa23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 POLR2AP24928 1970 aaKnown RBP23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 SPEF2Q9C093 1822 aa23.87■■□□□ 1.41
UBE2D4-208ENST00000454350 RAD17O75943 681 aa23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 FMR1Q06787 632 aaKnown RBP eCLIP23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 KSR2Q6VAB6 950 aa23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 G2E3Q7L622 706 aa23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 CHMP4AQ9BY43 222 aa23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 PSME4Q14997 1843 aa23.86■■□□□ 1.41
UBE2D4-208ENST00000454350 PI4KAP2A4QPH2 592 aa23.85■■□□□ 1.41
UBE2D4-208ENST00000454350 DDX58O95786 925 aaKnown RBP23.85■■□□□ 1.41
UBE2D4-208ENST00000454350 TWISTNBQ3B726 338 aaPredicted RBP23.85■■□□□ 1.41
UBE2D4-208ENST00000454350 PI4KAP1Q8N8J0 262 aa23.85■■□□□ 1.41
UBE2D4-208ENST00000454350 ADARB2Q9NS39 739 aaKnown RBP23.85■■□□□ 1.41
UBE2D4-208ENST00000454350 PDE8AO60658 829 aa23.84■■□□□ 1.41
UBE2D4-208ENST00000454350 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
UBE2D4-208ENST00000454350 VEGFBP49765 207 aa23.83■■□□□ 1.41
UBE2D4-208ENST00000454350 WASHC4Q2M389 1173 aa23.83■■□□□ 1.41
UBE2D4-208ENST00000454350 PGAP2Q9UHJ9 254 aa23.83■■□□□ 1.41
UBE2D4-208ENST00000454350 FANCIQ9NVI1 1328 aa23.83■■□□□ 1.4
UBE2D4-208ENST00000454350 SHTN1A0MZ66 631 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 RASSF10A6NK89 507 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 ANP32CO43423 234 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 HIRAP54198 1017 aaPredicted RBP23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 TNIP1Q15025 636 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 TBC1D16Q8TBP0 767 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 GPR101Q96P66 508 aaPredicted RBP23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 PODXL2Q9NZ53 605 aa23.82■■□□□ 1.4
UBE2D4-208ENST00000454350 TRAF5O00463 557 aa23.81■■□□□ 1.4
UBE2D4-208ENST00000454350 HSP90B1P14625 803 aaKnown RBP23.81■■□□□ 1.4
UBE2D4-208ENST00000454350 DBNDD1Q9H9R9 158 aa23.81■■□□□ 1.4
UBE2D4-208ENST00000454350 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 RIMBP2O15034 1052 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 SLC4A2P04920 1241 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 CCDC152Q4G0S7 254 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 CST9Q5W186 159 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 STK31Q9BXU1 1019 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 KCNQ5Q9NR82 932 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 THSD7BQ9C0I4 1608 aa23.8■■□□□ 1.4
UBE2D4-208ENST00000454350 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 PSMD14O00487 310 aa23.79■■□□□ 1.4
UBE2D4-208ENST00000454350 CWF19L2Q2TBE0 894 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms