RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HPS1Q92902 700 aa6.34□□□□□ -1.39
HMGN3P1-201ENST00000453847 RNF166Q96A37 237 aaPredicted RBP6.34□□□□□ -1.39
HMGN3P1-201ENST00000453847 TLDC2A0PJX2 215 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 PHACTR2O75167 634 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 GTF2E1P29083 439 aaPredicted RBP6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 HIF1AQ16665 826 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 NBPF1Q3BBV0 1214 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 EGFRP00533 1210 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 MSX1P28360 303 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 VEGFBP49765 207 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TYRO3Q06418 890 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 IFFO2Q5TF58 517 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TRIM67Q6ZTA4 783 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TBX22Q9Y458 520 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CYP2E1P05181 493 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 TATP17735 454 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CDK11BP21127 795 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CTC1Q2NKJ3 1217 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 KIAA0319Q5VV43 1072 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SPNS2Q8IVW8 549 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 RASGRP4Q8TDF6 673 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZCCHC2Q9C0B9 1178 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1W2PP55 124 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 F6X3S4 739 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 XYLBO75191 536 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 GADD45BO75293 160 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 RHOQP17081 205 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZNF746Q6NUN9 644 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 VPS37DQ86XT2 251 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 CYP4X1Q8N118 509 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 NOC4LQ9BVI4 516 aaKnown RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 HIRIP3Q9BW71 556 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 NEUROD4Q9HD90 331 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 SBNO2Q9Y2G9 1366 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 SERINC3Q13530 473 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 EGFLAMQ63HQ2 1017 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 SDE2Q6IQ49 451 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 NLRP13Q86W25 1043 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 HCN2Q9UL51 889 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1B0GTH6 734 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 THBS1P07996 1170 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 GARTP22102 1010 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 LYSMD3Q7Z3D4 306 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 SPON2Q9BUD6 331 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 MINDY4BA8MYZ0 360 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CAPN5O15484 640 aaPredicted RBP6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SASH3O75995 380 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CES1P23141 567 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 GSTT1P30711 240 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TCEAL1Q15170 157 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SOGA3Q5TF21 947 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TCF12Q99081 682 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 ABCB6Q9NP58 842 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 C11orf16Q9NQ32 467 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 KANSL3Q9P2N6 904 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TMA7Q9Y2S6 64 aaKnown RBP6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TARSP26639 723 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 ETFBP38117 255 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms