RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 RTKN2Q8IZC4 609 aa18.63■□□□□ 0.57
VPS16-205ENST00000453689 ZNF526Q8TF50 670 aaPredicted RBP18.63■□□□□ 0.57
VPS16-205ENST00000453689 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
VPS16-205ENST00000453689 FKBP4Q02790 459 aaKnown RBP eCLIP18.62■□□□□ 0.57
VPS16-205ENST00000453689 GRAPQ13588 217 aa18.62■□□□□ 0.57
VPS16-205ENST00000453689 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
VPS16-205ENST00000453689 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
VPS16-205ENST00000453689 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
VPS16-205ENST00000453689 LTBP1Q14766 1721 aa18.62■□□□□ 0.57
VPS16-205ENST00000453689 H7C1W4 665 aa18.61■□□□□ 0.57
VPS16-205ENST00000453689 BBOX1O75936 387 aa18.61■□□□□ 0.57
VPS16-205ENST00000453689 BEND3Q5T5X7 828 aa18.61■□□□□ 0.57
VPS16-205ENST00000453689 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
VPS16-205ENST00000453689 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
VPS16-205ENST00000453689 ZC3H4Q9UPT8 1303 aaKnown RBP18.6■□□□□ 0.57
VPS16-205ENST00000453689 GPBP1L1Q9HC44 474 aaPredicted RBP18.6■□□□□ 0.57
VPS16-205ENST00000453689 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
VPS16-205ENST00000453689 PTPRCP08575 1304 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 CASP7P55210 303 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 CTSWP56202 376 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 SLC4A10Q6U841 1118 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 CELF1Q92879 486 aaKnown RBP18.59■□□□□ 0.57
VPS16-205ENST00000453689 PSMD1Q99460 953 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
VPS16-205ENST00000453689 A0A1B0GUL6 1792 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
VPS16-205ENST00000453689 WDR90Q96KV7 1748 aa18.58■□□□□ 0.57
VPS16-205ENST00000453689 COL4A5P29400 1685 aa18.58■□□□□ 0.57
VPS16-205ENST00000453689 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.56
VPS16-205ENST00000453689 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
VPS16-205ENST00000453689 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
VPS16-205ENST00000453689 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
VPS16-205ENST00000453689 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
VPS16-205ENST00000453689 TMX4Q9H1E5 349 aaPredicted RBP18.57■□□□□ 0.56
VPS16-205ENST00000453689 IARSP41252 1262 aaKnown RBP18.56■□□□□ 0.56
VPS16-205ENST00000453689 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
VPS16-205ENST00000453689 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
VPS16-205ENST00000453689 SRCIN1Q9C0H9 1055 aa18.56■□□□□ 0.56
VPS16-205ENST00000453689 ALDH1L1O75891 902 aa18.55■□□□□ 0.56
VPS16-205ENST00000453689 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
VPS16-205ENST00000453689 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
VPS16-205ENST00000453689 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
VPS16-205ENST00000453689 SCN4AP35499 1836 aa18.54■□□□□ 0.56
VPS16-205ENST00000453689 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
VPS16-205ENST00000453689 GRM8O00222 908 aa18.54■□□□□ 0.56
VPS16-205ENST00000453689 BRPF1P55201 1214 aaPredicted RBP18.54■□□□□ 0.56
VPS16-205ENST00000453689 MPNDQ8N594 471 aa18.54■□□□□ 0.56
VPS16-205ENST00000453689 DPP8Q6V1X1 898 aaPredicted RBP18.53■□□□□ 0.56
VPS16-205ENST00000453689 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
VPS16-205ENST00000453689 GREM2Q9H772 168 aa18.53■□□□□ 0.56
VPS16-205ENST00000453689 NMRK2Q9NPI5 230 aa18.53■□□□□ 0.56
VPS16-205ENST00000453689 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
VPS16-205ENST00000453689 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
VPS16-205ENST00000453689 KIF3CO14782 793 aa18.52■□□□□ 0.56
VPS16-205ENST00000453689 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
VPS16-205ENST00000453689 C9orf78Q9NZ63 289 aaPredicted RBP18.52■□□□□ 0.56
VPS16-205ENST00000453689 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
VPS16-205ENST00000453689 PSME4Q14997 1843 aa18.51■□□□□ 0.55
VPS16-205ENST00000453689 CSF1RP07333 972 aa18.51■□□□□ 0.55
VPS16-205ENST00000453689 FOXO4P98177 505 aa18.51■□□□□ 0.55
VPS16-205ENST00000453689 SUPT20HQ8NEM7 779 aa18.51■□□□□ 0.55
VPS16-205ENST00000453689 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
VPS16-205ENST00000453689 BCAR3O75815 825 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 GPSM2P81274 684 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 AOC3Q16853 763 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 LARGE2Q8N3Y3 721 aa18.5■□□□□ 0.55
VPS16-205ENST00000453689 UTYO14607 1347 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 FZD9O00144 591 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
VPS16-205ENST00000453689 ITGA6P23229 1130 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 RRAGCQ9HB90 399 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 NSFL1CQ9UNZ2 370 aaKnown RBP18.49■□□□□ 0.55
VPS16-205ENST00000453689 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
VPS16-205ENST00000453689 SCN9AQ15858 1988 aa18.48■□□□□ 0.55
VPS16-205ENST00000453689 DDNO94850 711 aaPredicted RBP18.48■□□□□ 0.55
VPS16-205ENST00000453689 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
VPS16-205ENST00000453689 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
VPS16-205ENST00000453689 LMBR1LQ6UX01 489 aa18.47■□□□□ 0.55
VPS16-205ENST00000453689 NIM1KQ8IY84 436 aa18.47■□□□□ 0.55
VPS16-205ENST00000453689 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
VPS16-205ENST00000453689 POLLQ9UGP5 575 aa18.47■□□□□ 0.55
VPS16-205ENST00000453689 ARHGAP45Q92619 1136 aa18.46■□□□□ 0.55
VPS16-205ENST00000453689 KAZALD1Q96I82 304 aa18.46■□□□□ 0.55
VPS16-205ENST00000453689 USP44Q9H0E7 712 aa18.46■□□□□ 0.55
VPS16-205ENST00000453689 BSDC1Q9NW68 430 aaPredicted RBP18.46■□□□□ 0.55
VPS16-205ENST00000453689 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
VPS16-205ENST00000453689 CHMP3Q9Y3E7 222 aa18.46■□□□□ 0.55
VPS16-205ENST00000453689 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
VPS16-205ENST00000453689 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
VPS16-205ENST00000453689 POTECB2RU33 542 aa18.45■□□□□ 0.54
VPS16-205ENST00000453689 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
VPS16-205ENST00000453689 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms