RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GORABQ5T7V8 394 aa14.16□□□□□ -0.14
VTA1-203ENST00000452973 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 BCL9O00512 1426 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 A0A1B0GUL7 405 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
VTA1-203ENST00000452973 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
VTA1-203ENST00000452973 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 PDRG1Q9NUG6 133 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 CEP126Q9P2H0 1117 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 TAF6LQ9Y6J9 622 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 PRPF40AO75400 957 aaKnown RBP14.15□□□□□ -0.14
VTA1-203ENST00000452973 CUL4AQ13619 759 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 NECTIN1Q15223 517 aa14.15□□□□□ -0.14
VTA1-203ENST00000452973 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
VTA1-203ENST00000452973 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
VTA1-203ENST00000452973 DZIP3Q86Y13 1208 aaKnown RBP14.14□□□□□ -0.15
VTA1-203ENST00000452973 MAP4K1Q92918 833 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 SNRKQ9NRH2 765 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 CYP46A1Q9Y6A2 500 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
VTA1-203ENST00000452973 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
VTA1-203ENST00000452973 TTC14Q96N46 770 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 COL15A1P39059 1388 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 SLC27A2O14975 620 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 LARGE1O95461 756 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 ZBTB38Q8NAP3 1195 aaPredicted RBP14.14□□□□□ -0.15
VTA1-203ENST00000452973 HAUS7Q99871 368 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 LIMCH1Q9UPQ0 1083 aa14.14□□□□□ -0.15
VTA1-203ENST00000452973 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
VTA1-203ENST00000452973 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
VTA1-203ENST00000452973 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
VTA1-203ENST00000452973 COL14A1Q05707 1796 aaKnown RBP14.13□□□□□ -0.15
VTA1-203ENST00000452973 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
VTA1-203ENST00000452973 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
VTA1-203ENST00000452973 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
VTA1-203ENST00000452973 PAPPAQ13219 1627 aa14.13□□□□□ -0.15
VTA1-203ENST00000452973 IFIT1P09914 478 aaKnown RBP14.12□□□□□ -0.15
VTA1-203ENST00000452973 ADORA1P30542 326 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 MARCH10Q8NA82 808 aaPredicted RBP14.12□□□□□ -0.15
VTA1-203ENST00000452973 PAG1Q9NWQ8 432 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 INTS4Q96HW7 963 aaKnown RBP14.12□□□□□ -0.15
VTA1-203ENST00000452973 GREM2Q9H772 168 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 ITGB4P16144 1822 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 RNF20Q5VTR2 975 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 NECAB1Q8N987 351 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 IL17RAQ96F46 866 aa14.12□□□□□ -0.15
VTA1-203ENST00000452973 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 IRS4O14654 1257 aaPredicted RBP14.11□□□□□ -0.15
VTA1-203ENST00000452973 TAF5LO75529 589 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 LDHAL6AQ6ZMR3 332 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 KCNQ2O43526 872 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 ITGA6P23229 1130 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 KCNQ4P56696 695 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 TRIM28Q13263 835 aaKnown RBP14.11□□□□□ -0.15
VTA1-203ENST00000452973 KBTBD3Q8NAB2 608 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
VTA1-203ENST00000452973 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
VTA1-203ENST00000452973 L1TD1Q5T7N2 865 aaKnown RBP14.1□□□□□ -0.15
VTA1-203ENST00000452973 CAVIN1Q6NZI2 390 aaKnown RBP14.1□□□□□ -0.15
VTA1-203ENST00000452973 CLEC17AQ6ZS10 378 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 GDPD2Q9HCC8 539 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 CNNM1Q9NRU3 951 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 SMC3Q9UQE7 1217 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 COL16A1Q07092 1604 aaPredicted RBP14.1□□□□□ -0.15
VTA1-203ENST00000452973 PTMSP20962 102 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 MCMDC2Q4G0Z9 681 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 METTL24Q5JXM2 366 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 TTC39AQ5SRH9 613 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 BLOC1S2Q6QNY1 142 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 LMBRD1Q9NUN5 540 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 ZNF609O15014 1411 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 BRD1O95696 1058 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 VPS53Q5VIR6 699 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 TTLL11Q8NHH1 800 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 XAGE2Q96GT9 111 aa14.1□□□□□ -0.15
VTA1-203ENST00000452973 MED23Q9ULK4 1368 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 TOM1O60784 492 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 XRCC6P12956 609 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■■■ 30.5
VTA1-203ENST00000452973 STK3Q13188 491 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 HSP90AB3PQ58FF7 597 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 PI16Q6UXB8 463 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 TJP1Q07157 1748 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 CIAO1O76071 339 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
VTA1-203ENST00000452973 PSMA5P28066 241 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
VTA1-203ENST00000452973 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
VTA1-203ENST00000452973 LOC102724428A0A0B4J2F2 783 aa14.08□□□□□ -0.15
VTA1-203ENST00000452973 SIK1P57059 783 aa14.08□□□□□ -0.15
VTA1-203ENST00000452973 ME3Q16798 604 aa14.08□□□□□ -0.15
VTA1-203ENST00000452973 GAS2L3Q86XJ1 694 aa14.08□□□□□ -0.15
VTA1-203ENST00000452973 HELBQ8NG08 1087 aaPredicted RBP14.08□□□□□ -0.15
VTA1-203ENST00000452973 IL6STP40189 918 aaPredicted RBP14.08□□□□□ -0.16
VTA1-203ENST00000452973 CTSWP56202 376 aa14.08□□□□□ -0.16
VTA1-203ENST00000452973 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms