RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 HSP90B1P14625 803 aaKnown RBP17.43■□□□□ 0.38
USP39-207ENST00000450066 RXRBP28702 533 aa17.43■□□□□ 0.38
USP39-207ENST00000450066 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
USP39-207ENST00000450066 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
USP39-207ENST00000450066 CCDC8Q9H0W5 538 aaPredicted RBP17.43■□□□□ 0.38
USP39-207ENST00000450066 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
USP39-207ENST00000450066 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
USP39-207ENST00000450066 NTSR2O95665 410 aa17.42■□□□□ 0.38
USP39-207ENST00000450066 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
USP39-207ENST00000450066 MYH3P11055 1940 aa17.42■□□□□ 0.38
USP39-207ENST00000450066 GREM2Q9H772 168 aa17.41■□□□□ 0.38
USP39-207ENST00000450066 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
USP39-207ENST00000450066 MSH5O43196 834 aa17.41■□□□□ 0.38
USP39-207ENST00000450066 ZPR1O75312 459 aa17.41■□□□□ 0.38
USP39-207ENST00000450066 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
USP39-207ENST00000450066 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
USP39-207ENST00000450066 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
USP39-207ENST00000450066 ITGA6P23229 1130 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 ANKRD18BA2A2Z9 1011 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 FAM177BA6PVY3 158 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 CHMLP26374 656 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
USP39-207ENST00000450066 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
USP39-207ENST00000450066 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
USP39-207ENST00000450066 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
USP39-207ENST00000450066 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
USP39-207ENST00000450066 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
USP39-207ENST00000450066 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
USP39-207ENST00000450066 REC8O95072 547 aa17.38■□□□□ 0.37
USP39-207ENST00000450066 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
USP39-207ENST00000450066 ADRA2BP18089 450 aa17.38■□□□□ 0.37
USP39-207ENST00000450066 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
USP39-207ENST00000450066 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
USP39-207ENST00000450066 TBC1D9BQ66K14 1250 aa17.38■□□□□ 0.37
USP39-207ENST00000450066 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
USP39-207ENST00000450066 ATP5JP18859 108 aa17.37■□□□□ 0.37
USP39-207ENST00000450066 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
USP39-207ENST00000450066 LAMB2P55268 1798 aa17.37■□□□□ 0.37
USP39-207ENST00000450066 DDX60Q8IY21 1712 aaKnown RBP17.37■□□□□ 0.37
USP39-207ENST00000450066 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
USP39-207ENST00000450066 RFC4P35249 363 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 LDHAL6AQ6ZMR3 332 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 EVI5LQ96CN4 794 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 USP26Q9BXU7 913 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
USP39-207ENST00000450066 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 ZNF609O15014 1411 aa17.36■□□□□ 0.37
USP39-207ENST00000450066 NYXQ9GZU5 481 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 PLSCR1O15162 318 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 PHF14O94880 888 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
USP39-207ENST00000450066 A0A1B0GUL7 405 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 TIMM10P62072 90 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 LRP5O75197 1615 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 COL24A1Q17RW2 1714 aa17.34■□□□□ 0.37
USP39-207ENST00000450066 RIC1Q4ADV7 1423 aa17.33■□□□□ 0.37
USP39-207ENST00000450066 PROM2Q8N271 834 aa17.33■□□□□ 0.37
USP39-207ENST00000450066 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.37
USP39-207ENST00000450066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
USP39-207ENST00000450066 SSFA2P28290 1259 aa17.33■□□□□ 0.36
USP39-207ENST00000450066 METTL24Q5JXM2 366 aa17.33■□□□□ 0.36
USP39-207ENST00000450066 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
USP39-207ENST00000450066 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
USP39-207ENST00000450066 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
USP39-207ENST00000450066 BECN1Q14457 450 aa17.32■□□□□ 0.36
USP39-207ENST00000450066 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
USP39-207ENST00000450066 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
USP39-207ENST00000450066 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
USP39-207ENST00000450066 KIF2CQ99661 725 aa17.32■□□□□ 0.36
USP39-207ENST00000450066 HAUS7Q99871 368 aa17.32■□□□□ 0.36
USP39-207ENST00000450066 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
USP39-207ENST00000450066 HIP1O00291 1037 aa17.31■□□□□ 0.36
USP39-207ENST00000450066 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
USP39-207ENST00000450066 APBA3O96018 575 aa17.31■□□□□ 0.36
USP39-207ENST00000450066 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
USP39-207ENST00000450066 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
USP39-207ENST00000450066 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
USP39-207ENST00000450066 SGSM2O43147 1006 aa17.3■□□□□ 0.36
USP39-207ENST00000450066 PDE8BO95263 885 aa17.3■□□□□ 0.36
USP39-207ENST00000450066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
USP39-207ENST00000450066 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
USP39-207ENST00000450066 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
USP39-207ENST00000450066 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
USP39-207ENST00000450066 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms