RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 AP5Z1O43299 807 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 ICE2Q659A1 982 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 ZNF622Q969S3 477 aaKnown RBP eCLIP15.9■□□□□ 0.141e-6■■■■□ 21.4
SYNGAP1-204ENST00000449372 SMARCA5O60264 1052 aaPredicted RBP15.89■□□□□ 0.14
SYNGAP1-204ENST00000449372 BEND3Q5T5X7 828 aa15.89■□□□□ 0.14
SYNGAP1-204ENST00000449372 USP48Q86UV5 1035 aa15.89■□□□□ 0.14
SYNGAP1-204ENST00000449372 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.14
SYNGAP1-204ENST00000449372 PHKG2P15735 406 aa15.89■□□□□ 0.13
SYNGAP1-204ENST00000449372 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.13
SYNGAP1-204ENST00000449372 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
SYNGAP1-204ENST00000449372 ANO2Q9NQ90 1003 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 SYT10Q6XYQ8 523 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 AOX1Q06278 1338 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 GYS2P54840 703 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 BMS1Q14692 1282 aaKnown RBP15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 HSP90AB4PQ58FF6 505 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 PRAMEF22A3QJZ6 481 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 MX1P20591 662 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 PDIA6Q15084 440 aa15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 ZNF215Q9UL58 517 aaPredicted RBP15.88■□□□□ 0.13
SYNGAP1-204ENST00000449372 CASQ1P31415 396 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 GTF3C6Q969F1 213 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 TMX3Q96JJ7 454 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 NCAPGQ9BPX3 1015 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 TRIM66O15016 1216 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 PDE1AP54750 535 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 POLA2Q14181 598 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 NEK11Q8NG66 645 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 RUFY2Q8WXA3 655 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
SYNGAP1-204ENST00000449372 MYO1CO00159 1063 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 PROSER3Q2NL68 480 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 LRRFIP2Q9Y608 721 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 ELF2Q15723 593 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 ZNF446Q9NWS9 450 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 MUM1L1Q5H9M0 696 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 TXLNBQ8N3L3 684 aa15.86■□□□□ 0.13
SYNGAP1-204ENST00000449372 CYP27B1O15528 508 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 LRMPQ12912 555 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 ESYT1Q9BSJ8 1104 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 CCDC186Q7Z3E2 898 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 RILPL2Q969X0 211 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 TOMM22Q9NS69 142 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 RAB11FIP3O75154 756 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 DNAAF4Q8WXU2 420 aa15.85■□□□□ 0.13
SYNGAP1-204ENST00000449372 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 NLRP2Q9NX02 1062 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 CUL4AQ13619 759 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 NFATC2IPQ8NCF5 419 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 GPATCH3Q96I76 525 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 ANXA1P04083 346 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 SLFNL1Q499Z3 407 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 DRC7Q8IY82 874 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 GPATCH11Q8N954 259 aa15.84■□□□□ 0.13
SYNGAP1-204ENST00000449372 NPHP1O15259 732 aa15.83■□□□□ 0.13
SYNGAP1-204ENST00000449372 NBPF7P0C2Y1 421 aaPredicted RBP15.83■□□□□ 0.13
SYNGAP1-204ENST00000449372 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.13
SYNGAP1-204ENST00000449372 EP400NLQ6ZTU2 488 aa15.83■□□□□ 0.13
SYNGAP1-204ENST00000449372 BANK1Q8NDB2 785 aa15.83■□□□□ 0.13
SYNGAP1-204ENST00000449372 BRMS1Q9HCU9 246 aa15.83■□□□□ 0.12
SYNGAP1-204ENST00000449372 SPG7Q9UQ90 795 aa15.83■□□□□ 0.12
SYNGAP1-204ENST00000449372 GUCY2CP25092 1073 aa15.83■□□□□ 0.12
SYNGAP1-204ENST00000449372 GIMAP6Q6P9H5 292 aa15.83■□□□□ 0.12
SYNGAP1-204ENST00000449372 EXOC6BQ9Y2D4 811 aa15.83■□□□□ 0.12
SYNGAP1-204ENST00000449372 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 LCMT1Q9UIC8 334 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 UTYO14607 1347 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 STAP2Q9UGK3 403 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 SMC3Q9UQE7 1217 aa15.82■□□□□ 0.12
SYNGAP1-204ENST00000449372 UBTFL1P0CB47 393 aaPredicted RBP15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 MTX1Q13505 466 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 POLR3GO15318 223 aaPredicted RBP15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 GOLGA6L1Q8N7Z2 621 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
SYNGAP1-204ENST00000449372 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms