RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 MYD88Q99836 296 aa32.1■■■□□ 2.73
HTATSF1-203ENST00000448450 RIC1Q4ADV7 1423 aa32.09■■■□□ 2.73
HTATSF1-203ENST00000448450 SNED1Q8TER0 1413 aa32.09■■■□□ 2.73
HTATSF1-203ENST00000448450 C3orf67Q6ZVT6 689 aa32.09■■■□□ 2.73
HTATSF1-203ENST00000448450 CC2D2BQ6DHV5 1058 aa32.08■■■□□ 2.73
HTATSF1-203ENST00000448450 RPGRQ92834 1020 aaKnown RBP32.08■■■□□ 2.73
HTATSF1-203ENST00000448450 HCLS1P14317 486 aaPredicted RBP32.07■■■□□ 2.72
HTATSF1-203ENST00000448450 SLC10A5Q5PT55 438 aa32.07■■■□□ 2.72
HTATSF1-203ENST00000448450 MAP3K2Q9Y2U5 619 aa32.07■■■□□ 2.72
HTATSF1-203ENST00000448450 PI4KAP2A4QPH2 592 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 E9PSI1 815 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 FOXN1O15353 648 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 PI4KAP1Q8N8J0 262 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 AIDAQ96BJ3 306 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 CDCA7LQ96GN5 454 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 NLRP3Q96P20 1036 aa32.06■■■□□ 2.72
HTATSF1-203ENST00000448450 SH3TC1Q8TE82 1336 aa32.05■■■□□ 2.72
HTATSF1-203ENST00000448450 SLFN5Q08AF3 891 aa32.05■■■□□ 2.72
HTATSF1-203ENST00000448450 RTL5Q5HYW3 569 aaPredicted RBP32.05■■■□□ 2.72
HTATSF1-203ENST00000448450 KSR2Q6VAB6 950 aa32.05■■■□□ 2.72
HTATSF1-203ENST00000448450 VEGFBP49765 207 aa32.04■■■□□ 2.72
HTATSF1-203ENST00000448450 FAM89AQ96GI7 184 aa32.04■■■□□ 2.72
HTATSF1-203ENST00000448450 METTL22Q9BUU2 404 aaPredicted RBP32.04■■■□□ 2.72
HTATSF1-203ENST00000448450 HOXA10P31260 410 aaPredicted RBP32.03■■■□□ 2.72
HTATSF1-203ENST00000448450 EIF6P56537 245 aaKnown RBP32.03■■■□□ 2.72
HTATSF1-203ENST00000448450 TRIM28Q13263 835 aaKnown RBP32.03■■■□□ 2.72
HTATSF1-203ENST00000448450 GRIPAP1Q4V328 841 aa32.03■■■□□ 2.72
HTATSF1-203ENST00000448450 FLIIQ13045 1269 aa32.02■■■□□ 2.72
HTATSF1-203ENST00000448450 MAP1SQ66K74 1059 aaPredicted RBP32.02■■■□□ 2.72
HTATSF1-203ENST00000448450 CNTROBQ8N137 903 aa32.02■■■□□ 2.72
HTATSF1-203ENST00000448450 RBM17Q96I25 401 aaKnown RBP32.01■■■□□ 2.71
HTATSF1-203ENST00000448450 PRDM10Q9NQV6 1147 aa32.01■■■□□ 2.71
HTATSF1-203ENST00000448450 GJA3Q9Y6H8 435 aa32.01■■■□□ 2.71
HTATSF1-203ENST00000448450 COL4A5P29400 1685 aa32.01■■■□□ 2.71
HTATSF1-203ENST00000448450 LMOD1P29536 600 aaPredicted RBP32■■■□□ 2.71
HTATSF1-203ENST00000448450 CTCFP49711 727 aaPredicted RBP32■■■□□ 2.71
HTATSF1-203ENST00000448450 FKBP5Q13451 457 aaPredicted RBP32■■■□□ 2.71
HTATSF1-203ENST00000448450 CACNA1FO60840 1977 aa31.99■■■□□ 2.71
HTATSF1-203ENST00000448450 JARID2Q92833 1246 aaPredicted RBP31.99■■■□□ 2.71
HTATSF1-203ENST00000448450 LARGE2Q8N3Y3 721 aa31.98■■■□□ 2.71
HTATSF1-203ENST00000448450 CCDC191Q8NCU4 936 aa31.98■■■□□ 2.71
HTATSF1-203ENST00000448450 RASSF10A6NK89 507 aa31.97■■■□□ 2.71
HTATSF1-203ENST00000448450 PPEF1O14829 653 aaPredicted RBP31.97■■■□□ 2.71
HTATSF1-203ENST00000448450 CRAMP1Q96RY5 1269 aa31.97■■■□□ 2.71
HTATSF1-203ENST00000448450 CWC25Q9NXE8 425 aaPredicted RBP31.97■■■□□ 2.71
HTATSF1-203ENST00000448450 LTBP1Q14766 1721 aa31.97■■■□□ 2.71
HTATSF1-203ENST00000448450 NEXNQ0ZGT2 675 aa31.96■■■□□ 2.71
HTATSF1-203ENST00000448450 DEFB115Q30KQ5 88 aa31.96■■■□□ 2.71
HTATSF1-203ENST00000448450 IRS4O14654 1257 aaPredicted RBP31.95■■■□□ 2.71
HTATSF1-203ENST00000448450 IGKV5-2P06315 115 aa31.95■■■□□ 2.71
HTATSF1-203ENST00000448450 ZBTB38Q8NAP3 1195 aaPredicted RBP31.95■■■□□ 2.71
HTATSF1-203ENST00000448450 WBP1LQ9NX94 342 aa31.95■■■□□ 2.71
HTATSF1-203ENST00000448450 ABT1Q9ULW3 272 aaKnown RBP31.95■■■□□ 2.71
HTATSF1-203ENST00000448450 LAMB2P55268 1798 aa31.94■■■□□ 2.7
HTATSF1-203ENST00000448450 TMX4Q9H1E5 349 aaPredicted RBP31.94■■■□□ 2.7
HTATSF1-203ENST00000448450 CWF19L2Q2TBE0 894 aaKnown RBP31.93■■■□□ 2.7
HTATSF1-203ENST00000448450 SCNN1DP51172 638 aa31.92■■■□□ 2.7
HTATSF1-203ENST00000448450 NIM1KQ8IY84 436 aa31.92■■■□□ 2.7
HTATSF1-203ENST00000448450 TRMT2AQ8IZ69 625 aaKnown RBP31.92■■■□□ 2.7
HTATSF1-203ENST00000448450 DNAAF4Q8WXU2 420 aa31.92■■■□□ 2.7
HTATSF1-203ENST00000448450 DDX60Q8IY21 1712 aaKnown RBP31.92■■■□□ 2.7
HTATSF1-203ENST00000448450 PCCAP05165 728 aaPredicted RBP31.91■■■□□ 2.7
HTATSF1-203ENST00000448450 ABCC4O15439 1325 aa31.91■■■□□ 2.7
HTATSF1-203ENST00000448450 F6X3S4 739 aa31.9■■■□□ 2.7
HTATSF1-203ENST00000448450 HNRNPUQ00839 825 aaKnown RBP eCLIP31.9■■■□□ 2.7
HTATSF1-203ENST00000448450 DDX46Q7L014 1031 aaKnown RBP31.9■■■□□ 2.7
HTATSF1-203ENST00000448450 SLC51AQ86UW1 340 aa31.9■■■□□ 2.7
HTATSF1-203ENST00000448450 NEURL1BA8MQ27 555 aa31.89■■■□□ 2.7
HTATSF1-203ENST00000448450 PPIP5K2O43314 1243 aa31.89■■■□□ 2.7
HTATSF1-203ENST00000448450 EPS15P42566 896 aa31.89■■■□□ 2.7
HTATSF1-203ENST00000448450 WDR33Q9C0J8 1336 aaKnown RBP31.89■■■□□ 2.7
HTATSF1-203ENST00000448450 TRPM7Q96QT4 1865 aa31.89■■■□□ 2.69
HTATSF1-203ENST00000448450 LBX1P52954 281 aa31.88■■■□□ 2.69
HTATSF1-203ENST00000448450 MAP2K1Q02750 393 aaPredicted RBP31.88■■■□□ 2.69
HTATSF1-203ENST00000448450 USP50Q70EL3 339 aaPredicted RBP31.88■■■□□ 2.69
HTATSF1-203ENST00000448450 TAF1P21675 1872 aa31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 THSD7BQ9C0I4 1608 aa31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 SF3B3Q15393 1217 aaKnown RBP31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 MRPL50Q8N5N7 158 aaKnown RBP31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 VPS33BQ9H267 617 aa31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 ATP6V0A2Q9Y487 856 aa31.86■■■□□ 2.69
HTATSF1-203ENST00000448450 AOC3Q16853 763 aa31.85■■■□□ 2.69
HTATSF1-203ENST00000448450 SSH1Q8WYL5 1049 aa31.85■■■□□ 2.69
HTATSF1-203ENST00000448450 HSP90B1P14625 803 aaKnown RBP31.84■■■□□ 2.69
HTATSF1-203ENST00000448450 SUPT20HQ8NEM7 779 aa31.84■■■□□ 2.69
HTATSF1-203ENST00000448450 LINS1Q8NG48 757 aa31.84■■■□□ 2.69
HTATSF1-203ENST00000448450 BCL2L13Q9BXK5 485 aa31.84■■■□□ 2.69
HTATSF1-203ENST00000448450 BBOX1O75936 387 aa31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 GRAPQ13588 217 aa31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 GCKRQ14397 625 aa31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 PAXIP1Q6ZW49 1069 aaPredicted RBP31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 GRAPLQ8TC17 118 aaPredicted RBP31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 CCDC85AQ96PX6 553 aaPredicted RBP31.83■■■□□ 2.69
HTATSF1-203ENST00000448450 PDE8AO60658 829 aa31.82■■■□□ 2.68
HTATSF1-203ENST00000448450 HSPA8P11142 646 aaKnown RBP31.82■■■□□ 2.68
HTATSF1-203ENST00000448450 ECE1P42892 770 aa31.81■■■□□ 2.68
HTATSF1-203ENST00000448450 SLC4A10Q6U841 1118 aa31.81■■■□□ 2.68
HTATSF1-203ENST00000448450 UBE3BQ7Z3V4 1068 aa31.81■■■□□ 2.68
HTATSF1-203ENST00000448450 ADARB2Q9NS39 739 aaKnown RBP31.81■■■□□ 2.68
HTATSF1-203ENST00000448450 GPRC5DQ9NZD1 345 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms