RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MCM2P49736 904 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 ATG9AQ7Z3C6 839 aa17.78■□□□□ 0.44
SF1-211ENST00000448404 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
SF1-211ENST00000448404 CWC25Q9NXE8 425 aaPredicted RBP17.78■□□□□ 0.44
SF1-211ENST00000448404 RABL6Q3YEC7 729 aaPredicted RBP17.77■□□□□ 0.44
SF1-211ENST00000448404 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
SF1-211ENST00000448404 MAP4K1Q92918 833 aa17.77■□□□□ 0.44
SF1-211ENST00000448404 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
SF1-211ENST00000448404 FIBPO43427 364 aa17.77■□□□□ 0.43
SF1-211ENST00000448404 GJB2P29033 226 aa17.77■□□□□ 0.43
SF1-211ENST00000448404 GLIPR1L2Q4G1C9 344 aa17.77■□□□□ 0.43
SF1-211ENST00000448404 PI16Q6UXB8 463 aa17.77■□□□□ 0.43
SF1-211ENST00000448404 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.43
SF1-211ENST00000448404 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
SF1-211ENST00000448404 FAM177BA6PVY3 158 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
SF1-211ENST00000448404 FOSBP53539 338 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 HLFQ16534 295 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 MPNDQ8N594 471 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 CARD10Q9BWT7 1032 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 SMC3Q9UQE7 1217 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
SF1-211ENST00000448404 H7C1W4 665 aa17.76■□□□□ 0.43
SF1-211ENST00000448404 TCHHQ07283 1943 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 ADORA1P30542 326 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
SF1-211ENST00000448404 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 GLI3P10071 1580 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 TAF5LO75529 589 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
SF1-211ENST00000448404 CHST3Q7LGC8 479 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 MRC1P22897 1456 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 LMTK3Q96Q04 1460 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
SF1-211ENST00000448404 ZNF609O15014 1411 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 STX6O43752 255 aa17.74■□□□□ 0.43
SF1-211ENST00000448404 AFDNP55196 1824 aaKnown RBP17.73■□□□□ 0.43
SF1-211ENST00000448404 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
SF1-211ENST00000448404 ATP5JP18859 108 aa17.73■□□□□ 0.43
SF1-211ENST00000448404 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF1-211ENST00000448404 DNM1Q05193 864 aaKnown RBP17.73■□□□□ 0.43
SF1-211ENST00000448404 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
SF1-211ENST00000448404 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
SF1-211ENST00000448404 SNAP23O00161 211 aa17.72■□□□□ 0.43
SF1-211ENST00000448404 SCARF1Q14162 830 aa17.72■□□□□ 0.43
SF1-211ENST00000448404 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SF1-211ENST00000448404 ARFGEF2Q9Y6D5 1785 aa17.72■□□□□ 0.43
SF1-211ENST00000448404 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 MED23Q9ULK4 1368 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 JAK2O60674 1132 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 CYP21A2P08686 494 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
SF1-211ENST00000448404 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.43
SF1-211ENST00000448404 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
SF1-211ENST00000448404 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
SF1-211ENST00000448404 STOX1Q6ZVD7 989 aa17.7■□□□□ 0.42
SF1-211ENST00000448404 WDR33Q9C0J8 1336 aaKnown RBP17.7■□□□□ 0.42
SF1-211ENST00000448404 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
SF1-211ENST00000448404 NKX1-1Q15270 411 aaPredicted RBP17.69■□□□□ 0.42
SF1-211ENST00000448404 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
SF1-211ENST00000448404 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
SF1-211ENST00000448404 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
SF1-211ENST00000448404 HAUS7Q99871 368 aa17.69■□□□□ 0.42
SF1-211ENST00000448404 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
SF1-211ENST00000448404 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
SF1-211ENST00000448404 EYA2O00167 538 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 ZNF445P59923 1031 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 F13A1P00488 732 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 KCNQ4P56696 695 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
SF1-211ENST00000448404 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
SF1-211ENST00000448404 PAG1Q9NWQ8 432 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
SF1-211ENST00000448404 PTMSP20962 102 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 HAND2P61296 217 aa17.68■□□□□ 0.42
SF1-211ENST00000448404 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
SF1-211ENST00000448404 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
SF1-211ENST00000448404 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
SF1-211ENST00000448404 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
SF1-211ENST00000448404 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.67■□□□□ 0.42
SF1-211ENST00000448404 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
SF1-211ENST00000448404 KCNB2Q92953 911 aa17.67■□□□□ 0.42
SF1-211ENST00000448404 NUTM2BA6NNL0 878 aaPredicted RBP17.66■□□□□ 0.42
SF1-211ENST00000448404 NUTM2EB1AL46 878 aaPredicted RBP17.66■□□□□ 0.42
SF1-211ENST00000448404 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
SF1-211ENST00000448404 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
SF1-211ENST00000448404 NUTM2AQ8IVF1 878 aaPredicted RBP17.66■□□□□ 0.42
SF1-211ENST00000448404 TRIM44Q96DX7 344 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms