RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 CFAP100Q494V2 611 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 XPO4Q9C0E2 1151 aaKnown RBP18.3■□□□□ 0.52
SIK3-205ENST00000446921 BIN2Q9UBW5 565 aaPredicted RBP18.3■□□□□ 0.52
SIK3-205ENST00000446921 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
SIK3-205ENST00000446921 SSBP05455 408 aaKnown RBP eCLIP18.3■□□□□ 0.52
SIK3-205ENST00000446921 IRX1P78414 480 aaPredicted RBP18.3■□□□□ 0.52
SIK3-205ENST00000446921 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 SUGCTQ9HAC7 445 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 CCDC189A1A4V9 331 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 TUBB4AP04350 444 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 ELF1P32519 619 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 IL1RAPL2Q9NP60 686 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
SIK3-205ENST00000446921 LMOD1P29536 600 aaPredicted RBP18.29■□□□□ 0.52
SIK3-205ENST00000446921 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 AKAP2Q9Y2D5 859 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 RUFY3Q7L099 469 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
SIK3-205ENST00000446921 CYP46A1Q9Y6A2 500 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 AKAP17AQ02040 695 aaKnown RBP18.29■□□□□ 0.52
SIK3-205ENST00000446921 GOLGA8FQ08AF8 430 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 GOLGA8DPQ0D2H9 430 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
SIK3-205ENST00000446921 PTPN21Q16825 1174 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
SIK3-205ENST00000446921 VAMP4O75379 141 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 GBP2P32456 591 aaPredicted RBP18.28■□□□□ 0.52
SIK3-205ENST00000446921 FAM169AQ9Y6X4 670 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 TCHHQ07283 1943 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 LARGE1O95461 756 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 CHMP4BP1P59074 171 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 MAP9Q49MG5 647 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
SIK3-205ENST00000446921 MEIS3Q99687 375 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 CCDC151A5D8V7 595 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 CEP85Q6P2H3 762 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 LEO1Q8WVC0 666 aaPredicted RBP18.28■□□□□ 0.52
SIK3-205ENST00000446921 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 GDAP1L1Q96MZ0 367 aa18.28■□□□□ 0.52
SIK3-205ENST00000446921 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 ME1P48163 572 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 KIF4BQ2VIQ3 1234 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 ARMC3Q5W041 872 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
SIK3-205ENST00000446921 PRDM16Q9HAZ2 1276 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.27■□□□□ 0.52
SIK3-205ENST00000446921 TXLNAP40222 546 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 BRD3Q15059 726 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 KIRREL3Q8IZU9 778 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 CABS1Q96KC9 395 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 SAMM50Q9Y512 469 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 A2MP01023 1474 aa18.27■□□□□ 0.52
SIK3-205ENST00000446921 DIAPH1O60610 1272 aaKnown RBP18.27■□□□□ 0.51
SIK3-205ENST00000446921 GNAI3P08754 354 aa18.27■□□□□ 0.51
SIK3-205ENST00000446921 CCDC93Q567U6 631 aa18.27■□□□□ 0.51
SIK3-205ENST00000446921 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
SIK3-205ENST00000446921 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
SIK3-205ENST00000446921 G3BP2Q9UN86 482 aaKnown RBP18.26■□□□□ 0.51
SIK3-205ENST00000446921 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
SIK3-205ENST00000446921 SCRN1Q12765 414 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 PHLPP2Q6ZVD8 1323 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
SIK3-205ENST00000446921 GNAI1P63096 354 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
SIK3-205ENST00000446921 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
SIK3-205ENST00000446921 ACTN3Q08043 901 aaPredicted RBP18.25■□□□□ 0.51
SIK3-205ENST00000446921 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 ARHGAP45Q92619 1136 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 TTC41PQ6P2S7 1318 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
SIK3-205ENST00000446921 HSP90AA4PQ58FG1 418 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 NUTM1Q86Y26 1132 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 BCAS4Q8TDM0 211 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 ITFG2Q969R8 447 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 CRACR2AQ9BSW2 395 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 GBP3Q9H0R5 595 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 ABCB6Q9NP58 842 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 ZSCAN31Q96LW9 406 aaPredicted RBP18.25■□□□□ 0.51
SIK3-205ENST00000446921 KANK1Q14678 1352 aa18.25■□□□□ 0.51
SIK3-205ENST00000446921 RPSAP08865 295 aaKnown RBP18.24■□□□□ 0.51
SIK3-205ENST00000446921 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
SIK3-205ENST00000446921 KAT2BQ92831 832 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 MIEF2Q96C03 454 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 FAM71BQ8TC56 605 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 ZNF428Q96B54 188 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 RNF40O75150 1001 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 ARMCX5Q6P1M9 558 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 DHX58Q96C10 678 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 MPHOSPH8Q99549 860 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 SKAP2O75563 359 aaPredicted RBP18.24■□□□□ 0.51
SIK3-205ENST00000446921 ERCC3P19447 782 aa18.24■□□□□ 0.51
SIK3-205ENST00000446921 SH3GL3Q99963 347 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms