RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
HDAC4-204ENST00000446876 GRAPLQ8TC17 118 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-204ENST00000446876 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
HDAC4-204ENST00000446876 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-204ENST00000446876 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
HDAC4-204ENST00000446876 PDE8AO60658 829 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 SLC4A10Q6U841 1118 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
HDAC4-204ENST00000446876 H7C1W4 665 aa18.87■□□□□ 0.61
HDAC4-204ENST00000446876 COL4A5P29400 1685 aa18.86■□□□□ 0.61
HDAC4-204ENST00000446876 BBOX1O75936 387 aa18.86■□□□□ 0.61
HDAC4-204ENST00000446876 CTSWP56202 376 aa18.86■□□□□ 0.61
HDAC4-204ENST00000446876 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
HDAC4-204ENST00000446876 CC2D2BQ6DHV5 1058 aa18.86■□□□□ 0.61
HDAC4-204ENST00000446876 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
HDAC4-204ENST00000446876 CASP7P55210 303 aa18.85■□□□□ 0.61
HDAC4-204ENST00000446876 NMRK2Q9NPI5 230 aa18.85■□□□□ 0.61
HDAC4-204ENST00000446876 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
HDAC4-204ENST00000446876 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
HDAC4-204ENST00000446876 SP8Q8IXZ3 490 aa18.84■□□□□ 0.61
HDAC4-204ENST00000446876 PSMD1Q99460 953 aa18.84■□□□□ 0.61
HDAC4-204ENST00000446876 PTPRCP08575 1304 aa18.83■□□□□ 0.61
HDAC4-204ENST00000446876 ZBED9Q6R2W3 1325 aa18.83■□□□□ 0.61
HDAC4-204ENST00000446876 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.61
HDAC4-204ENST00000446876 CT47B1P0C2W7 299 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-204ENST00000446876 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
HDAC4-204ENST00000446876 TTLL11Q8NHH1 800 aa18.83■□□□□ 0.6
HDAC4-204ENST00000446876 LTBP1Q14766 1721 aa18.83■□□□□ 0.6
HDAC4-204ENST00000446876 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
HDAC4-204ENST00000446876 SRCIN1Q9C0H9 1055 aa18.82■□□□□ 0.6
HDAC4-204ENST00000446876 TMX4Q9H1E5 349 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-204ENST00000446876 GREM2Q9H772 168 aa18.82■□□□□ 0.6
HDAC4-204ENST00000446876 KIF3CO14782 793 aa18.81■□□□□ 0.6
HDAC4-204ENST00000446876 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
HDAC4-204ENST00000446876 RPS8P62241 208 aaKnown RBP18.81■□□□□ 0.6
HDAC4-204ENST00000446876 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-204ENST00000446876 MPNDQ8N594 471 aa18.81■□□□□ 0.6
HDAC4-204ENST00000446876 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 GLTPD2A6NH11 291 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 GRM8O00222 908 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 PLA2G12BQ9BX93 195 aa18.8■□□□□ 0.6
HDAC4-204ENST00000446876 NOB1Q9ULX3 412 aaKnown RBP18.8■□□□□ 0.6
HDAC4-204ENST00000446876 GPSM2P81274 684 aa18.79■□□□□ 0.6
HDAC4-204ENST00000446876 AOC3Q16853 763 aa18.79■□□□□ 0.6
HDAC4-204ENST00000446876 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
HDAC4-204ENST00000446876 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
HDAC4-204ENST00000446876 C9orf78Q9NZ63 289 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-204ENST00000446876 WDR90Q96KV7 1748 aa18.78■□□□□ 0.6
HDAC4-204ENST00000446876 PPIP5K2O43314 1243 aa18.78■□□□□ 0.6
HDAC4-204ENST00000446876 ANKRD18AQ8IVF6 992 aa18.78■□□□□ 0.6
HDAC4-204ENST00000446876 LARGE2Q8N3Y3 721 aa18.78■□□□□ 0.6
HDAC4-204ENST00000446876 RTFDC1Q9BY42 306 aaPredicted RBP18.78■□□□□ 0.6
HDAC4-204ENST00000446876 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
HDAC4-204ENST00000446876 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-204ENST00000446876 FOXO4P98177 505 aa18.77■□□□□ 0.6
HDAC4-204ENST00000446876 GPR101Q96P66 508 aaPredicted RBP18.77■□□□□ 0.6
HDAC4-204ENST00000446876 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
HDAC4-204ENST00000446876 BCAR3O75815 825 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 CSF1RP07333 972 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-204ENST00000446876 ITGA6P23229 1130 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 BRPF1P55201 1214 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-204ENST00000446876 DPY19L2Q6NUT2 758 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 SUPT20HQ8NEM7 779 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 JDP2Q8WYK2 163 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 SUCLG2Q96I99 432 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
HDAC4-204ENST00000446876 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
HDAC4-204ENST00000446876 FZD9O00144 591 aa18.75■□□□□ 0.59
HDAC4-204ENST00000446876 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
HDAC4-204ENST00000446876 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 C1QTNF8P60827 252 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 LMBR1LQ6UX01 489 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 NIM1KQ8IY84 436 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 KAZALD1Q96I82 304 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 TNNQ9UQP3 1299 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 UTYO14607 1347 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
HDAC4-204ENST00000446876 POTECB2RU33 542 aa18.73■□□□□ 0.59
HDAC4-204ENST00000446876 C6orf229H3BNL8 230 aa18.73■□□□□ 0.59
HDAC4-204ENST00000446876 KIAA2012Q0VF49 1180 aa18.73■□□□□ 0.59
HDAC4-204ENST00000446876 TBC1D16Q8TBP0 767 aa18.73■□□□□ 0.59
HDAC4-204ENST00000446876 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
HDAC4-204ENST00000446876 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
HDAC4-204ENST00000446876 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
HDAC4-204ENST00000446876 UFL1O94874 794 aa18.72■□□□□ 0.59
HDAC4-204ENST00000446876 IGHMBP2P38935 993 aaKnown RBP18.72■□□□□ 0.59
HDAC4-204ENST00000446876 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-204ENST00000446876 USP44Q9H0E7 712 aa18.72■□□□□ 0.59
HDAC4-204ENST00000446876 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
HDAC4-204ENST00000446876 WTIPA6NIX2 430 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-204ENST00000446876 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms