RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SNRKQ9NRH2 765 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 E9PCH4 1651 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 GCP02774 474 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
TCOF1-206ENST00000445265 SIRT2Q8IXJ6 389 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 BICC1Q9H694 974 aaKnown RBP19.34■□□□□ 0.69
TCOF1-206ENST00000445265 ANKRD18BA2A2Z9 1011 aa19.34■□□□□ 0.69
TCOF1-206ENST00000445265 TOP1P11387 765 aaKnown RBP19.34■□□□□ 0.69
TCOF1-206ENST00000445265 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
TCOF1-206ENST00000445265 GAS2L3Q86XJ1 694 aa19.33■□□□□ 0.69
TCOF1-206ENST00000445265 KCNG4Q8TDN1 519 aa19.33■□□□□ 0.69
TCOF1-206ENST00000445265 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.69
TCOF1-206ENST00000445265 ZNHIT6Q9NWK9 470 aaKnown RBP19.33■□□□□ 0.68
TCOF1-206ENST00000445265 CDK12Q9NYV4 1490 aaPredicted RBP19.33■□□□□ 0.68
TCOF1-206ENST00000445265 TERF1P54274 439 aa19.33■□□□□ 0.68
TCOF1-206ENST00000445265 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 HAND2P61296 217 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 CBX1P83916 185 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 AK7Q96M32 723 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 RAI14Q9P0K7 980 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 MRPS27Q92552 414 aaKnown RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 TM6SF1Q9BZW5 370 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 TRMT1Q9NXH9 659 aaKnown RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
TCOF1-206ENST00000445265 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 CNNM3Q8NE01 707 aa19.32■□□□□ 0.68
TCOF1-206ENST00000445265 RUFY1Q96T51 708 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 ABCA6Q8N139 1617 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 ERLIN1O75477 346 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 MTMR7Q9Y216 660 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 SETBP1Q9Y6X0 1596 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 TMC6Q7Z403 805 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 CCDC150Q8NCX0 1101 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 PAG1Q9NWQ8 432 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 STAP2Q9UGK3 403 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 BIN1O00499 593 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 IFIT3O14879 490 aaKnown RBP19.31■□□□□ 0.68
TCOF1-206ENST00000445265 DHX32Q7L7V1 743 aaKnown RBP19.31■□□□□ 0.68
TCOF1-206ENST00000445265 CEP89Q96ST8 783 aa19.31■□□□□ 0.68
TCOF1-206ENST00000445265 NAP1L1P55209 391 aaKnown RBP19.3■□□□□ 0.68
TCOF1-206ENST00000445265 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
TCOF1-206ENST00000445265 RNF41Q9H4P4 317 aaPredicted RBP19.3■□□□□ 0.68
TCOF1-206ENST00000445265 TRMT112Q9UI30 125 aaKnown RBP19.3■□□□□ 0.68
TCOF1-206ENST00000445265 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
TCOF1-206ENST00000445265 CEP135Q66GS9 1140 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 SLC27A2O14975 620 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 SLC5A1P13866 664 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 METAP2P50579 478 aaKnown RBP eCLIP19.3■□□□□ 0.683e-8■■□□□ 13.7
TCOF1-206ENST00000445265 PKP1Q13835 747 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
TCOF1-206ENST00000445265 RAD21O60216 631 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 PPP4R3BQ5MIZ7 849 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 TMCO3Q6UWJ1 677 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 LGR6Q9HBX8 967 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 METP08581 1390 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 ATL3Q6DD88 541 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 PALD1Q9ULE6 856 aa19.29■□□□□ 0.68
TCOF1-206ENST00000445265 TFCP2Q12800 502 aa19.28■□□□□ 0.68
TCOF1-206ENST00000445265 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
TCOF1-206ENST00000445265 GADD45BO75293 160 aaPredicted RBP19.28■□□□□ 0.68
TCOF1-206ENST00000445265 SKILP12757 684 aa19.28■□□□□ 0.68
TCOF1-206ENST00000445265 PPFIA3O75145 1194 aa19.28■□□□□ 0.68
TCOF1-206ENST00000445265 SNW1Q13573 536 aaKnown RBP19.28■□□□□ 0.68
TCOF1-206ENST00000445265 CCDC102BQ68D86 513 aa19.28■□□□□ 0.68
TCOF1-206ENST00000445265 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.68
TCOF1-206ENST00000445265 CPSF1Q10570 1443 aaKnown RBP19.27■□□□□ 0.68
TCOF1-206ENST00000445265 GLI2P10070 1586 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 ARHGAP29Q52LW3 1261 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 TMEM67Q5HYA8 995 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 CDK5RAP3Q96JB5 506 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
TCOF1-206ENST00000445265 RGS12O14924 1447 aa19.27■□□□□ 0.67
TCOF1-206ENST00000445265 MICU3Q86XE3 530 aa19.27■□□□□ 0.67
TCOF1-206ENST00000445265 DCAF5Q96JK2 942 aa19.27■□□□□ 0.67
TCOF1-206ENST00000445265 EIF3JO75822 258 aaKnown RBP19.26■□□□□ 0.67
TCOF1-206ENST00000445265 PTPDC1A2A3K4 754 aa19.26■□□□□ 0.67
TCOF1-206ENST00000445265 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
TCOF1-206ENST00000445265 RNF113AO15541 343 aaKnown RBP19.26■□□□□ 0.67
TCOF1-206ENST00000445265 SYKP43405 635 aa19.26■□□□□ 0.67
TCOF1-206ENST00000445265 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
TCOF1-206ENST00000445265 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
TCOF1-206ENST00000445265 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
TCOF1-206ENST00000445265 UQCRFS1P1P0C7P4 283 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
TCOF1-206ENST00000445265 PTGS1P23219 599 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 LUZP1Q86V48 1076 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms