RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
SNX13-204ENST00000444712 SNRKQ9NRH2 765 aa18.95■□□□□ 0.62
SNX13-204ENST00000444712 AKAP2Q9Y2D5 859 aa18.95■□□□□ 0.62
SNX13-204ENST00000444712 LAMB2P55268 1798 aa18.94■□□□□ 0.62
SNX13-204ENST00000444712 NEK4P51957 841 aa18.94■□□□□ 0.62
SNX13-204ENST00000444712 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
SNX13-204ENST00000444712 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
SNX13-204ENST00000444712 NHSQ6T4R5 1651 aa18.94■□□□□ 0.62
SNX13-204ENST00000444712 MYH14Q7Z406 1995 aaKnown RBP18.93■□□□□ 0.62
SNX13-204ENST00000444712 ZNF34Q8IZ26 560 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 IL25Q9H293 177 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 CWC22Q9HCG8 908 aaKnown RBP18.93■□□□□ 0.62
SNX13-204ENST00000444712 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 HSP90B1P14625 803 aaKnown RBP18.93■□□□□ 0.62
SNX13-204ENST00000444712 GPTP24298 496 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 HAUS7Q99871 368 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 USP21Q9UK80 565 aa18.93■□□□□ 0.62
SNX13-204ENST00000444712 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
SNX13-204ENST00000444712 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
SNX13-204ENST00000444712 PDE8AO60658 829 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 CTSWP56202 376 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 PARP10Q53GL7 1025 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNX13-204ENST00000444712 TBC1D2BQ9UPU7 963 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 CCDC171Q6TFL3 1326 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
SNX13-204ENST00000444712 LRRC24Q50LG9 513 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
SNX13-204ENST00000444712 BTAF1O14981 1849 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 ANKRD18BA2A2Z9 1011 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 NMIQ13287 307 aaPredicted RBP18.9■□□□□ 0.62
SNX13-204ENST00000444712 ZNF594Q96JF6 807 aaPredicted RBP18.9■□□□□ 0.62
SNX13-204ENST00000444712 ITPK1Q13572 414 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
SNX13-204ENST00000444712 MED23Q9ULK4 1368 aa18.89■□□□□ 0.62
SNX13-204ENST00000444712 RGL2O15211 777 aa18.89■□□□□ 0.61
SNX13-204ENST00000444712 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.61
SNX13-204ENST00000444712 GBP4Q96PP9 640 aa18.89■□□□□ 0.61
SNX13-204ENST00000444712 SNX14Q9Y5W7 946 aa18.89■□□□□ 0.61
SNX13-204ENST00000444712 A0A1B0GUL7 405 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 PTMSP20962 102 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 NUCB2P80303 420 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 KCNB2Q92953 911 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 LRP5O75197 1615 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 ABCC12Q96J65 1359 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 UBN2Q6ZU65 1347 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 DDX11L8A8MPP1 907 aa18.88■□□□□ 0.61
SNX13-204ENST00000444712 ZKSCAN1P17029 563 aaPredicted RBP18.88■□□□□ 0.61
SNX13-204ENST00000444712 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
SNX13-204ENST00000444712 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
SNX13-204ENST00000444712 SH3TC1Q8TE82 1336 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 CAMTA2O94983 1202 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 ITGA6P23229 1130 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
SNX13-204ENST00000444712 CCDC158Q5M9N0 1113 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
SNX13-204ENST00000444712 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 KBTBD3Q8NAB2 608 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 CNTNAP4Q9C0A0 1308 aa18.87■□□□□ 0.61
SNX13-204ENST00000444712 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 KCNQ2O43526 872 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 MCM4P33991 863 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 MAP4K1Q92918 833 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 UTP14AQ9BVJ6 771 aaKnown RBP18.86■□□□□ 0.61
SNX13-204ENST00000444712 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
SNX13-204ENST00000444712 KCNJ4P48050 445 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 INTS4Q96HW7 963 aaKnown RBP18.86■□□□□ 0.61
SNX13-204ENST00000444712 FOXD4L1Q9NU39 408 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 PAG1Q9NWQ8 432 aa18.86■□□□□ 0.61
SNX13-204ENST00000444712 ARAP2Q8WZ64 1704 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 A0A0D9SFI3 127 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 IFIT1P09914 478 aaKnown RBP18.85■□□□□ 0.61
SNX13-204ENST00000444712 TIMM10P62072 90 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 PTH1RQ03431 593 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 CLEC4GQ6UXB4 293 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 TMX3Q96JJ7 454 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 SBF2Q86WG5 1849 aa18.85■□□□□ 0.61
SNX13-204ENST00000444712 CUL4AQ13619 759 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 GORABQ5T7V8 394 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 GREM2Q9H772 168 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 HMG20BQ9P0W2 317 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 LY75O60449 1722 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 MYH7P12883 1935 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 METTL24Q5JXM2 366 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 RIPOR2Q9Y4F9 1068 aa18.84■□□□□ 0.61
SNX13-204ENST00000444712 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
SNX13-204ENST00000444712 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
SNX13-204ENST00000444712 TTC39AQ5SRH9 613 aa18.83■□□□□ 0.61
SNX13-204ENST00000444712 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.61
SNX13-204ENST00000444712 TNPO1Q92973 898 aaKnown RBP18.83■□□□□ 0.61
SNX13-204ENST00000444712 RTL9Q8NET4 1388 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms