RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 IL15P40933 162 aaPredicted RBP26.77■■□□□ 1.88
PREB-206ENST00000444452 TEX13AQ9BXU3 409 aaPredicted RBP26.77■■□□□ 1.88
PREB-206ENST00000444452 CHMP3Q9Y3E7 222 aa26.77■■□□□ 1.88
PREB-206ENST00000444452 TAF5LO75529 589 aa26.76■■□□□ 1.87
PREB-206ENST00000444452 USPL1Q5W0Q7 1092 aa26.76■■□□□ 1.87
PREB-206ENST00000444452 ISCA1Q9BUE6 129 aa26.76■■□□□ 1.87
PREB-206ENST00000444452 TICAM2Q86XR7 235 aa26.75■■□□□ 1.87
PREB-206ENST00000444452 LARP6Q9BRS8 491 aaKnown RBP26.75■■□□□ 1.87
PREB-206ENST00000444452 ALDH8A1Q9H2A2 487 aaPredicted RBP26.75■■□□□ 1.87
PREB-206ENST00000444452 ZSCAN22P10073 491 aaPredicted RBP26.75■■□□□ 1.87
PREB-206ENST00000444452 STX6O43752 255 aa26.74■■□□□ 1.87
PREB-206ENST00000444452 CIAO1O76071 339 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 SYT1P21579 422 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 NASPP49321 788 aaPredicted RBP26.73■■□□□ 1.87
PREB-206ENST00000444452 TMEM87AQ8NBN3 555 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 TMEM63CQ9P1W3 806 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 EYA2O00167 538 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 TRIM28Q13263 835 aaKnown RBP26.73■■□□□ 1.87
PREB-206ENST00000444452 TCIRG1Q13488 830 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 CCDC83Q8IWF9 413 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 DNAJC2Q99543 621 aaKnown RBP26.73■■□□□ 1.87
PREB-206ENST00000444452 ZNF609O15014 1411 aa26.73■■□□□ 1.87
PREB-206ENST00000444452 PALLDQ8WX93 1383 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 ANKRD1Q15327 319 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 BLOC1S2Q6QNY1 142 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 RBM27Q9P2N5 1060 aaKnown RBP26.72■■□□□ 1.87
PREB-206ENST00000444452 NSFL1CQ9UNZ2 370 aaKnown RBP26.72■■□□□ 1.87
PREB-206ENST00000444452 DISP2A7MBM2 1401 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 ME3Q16798 604 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 KBTBD3Q8NAB2 608 aa26.72■■□□□ 1.87
PREB-206ENST00000444452 PIGBQ92521 554 aa26.71■■□□□ 1.87
PREB-206ENST00000444452 BTG4Q9NY30 223 aa26.71■■□□□ 1.87
PREB-206ENST00000444452 RPS6KB1P23443 525 aa26.7■■□□□ 1.87
PREB-206ENST00000444452 ST3GAL1Q11201 340 aa26.7■■□□□ 1.87
PREB-206ENST00000444452 KRT32Q14532 448 aa26.7■■□□□ 1.87
PREB-206ENST00000444452 GJB2P29033 226 aa26.7■■□□□ 1.86
PREB-206ENST00000444452 MCMDC2Q4G0Z9 681 aa26.7■■□□□ 1.86
PREB-206ENST00000444452 TPCN1Q9ULQ1 816 aa26.7■■□□□ 1.86
PREB-206ENST00000444452 ATP6V1DQ9Y5K8 247 aa26.7■■□□□ 1.86
PREB-206ENST00000444452 SH3TC1Q8TE82 1336 aa26.69■■□□□ 1.86
PREB-206ENST00000444452 COL14A1Q05707 1796 aaKnown RBP26.69■■□□□ 1.86
PREB-206ENST00000444452 FBXO3Q9UK99 471 aa26.69■■□□□ 1.86
PREB-206ENST00000444452 ASAP1Q9ULH1 1129 aa26.69■■□□□ 1.86
PREB-206ENST00000444452 NDUFB9Q9Y6M9 179 aa26.69■■□□□ 1.86
PREB-206ENST00000444452 F13A1P00488 732 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 PDIA4P13667 645 aaKnown RBP26.68■■□□□ 1.86
PREB-206ENST00000444452 LRSAM1Q6UWE0 723 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 U3KPZ7 1027 aaPredicted RBP26.68■■□□□ 1.86
PREB-206ENST00000444452 LRP6O75581 1613 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 STARD3NLO95772 234 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 CCDC173Q0VFZ6 552 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 KIF6Q6ZMV9 814 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 DDX46Q7L014 1031 aaKnown RBP26.68■■□□□ 1.86
PREB-206ENST00000444452 DNAJC10Q8IXB1 793 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 NEUROD6Q96NK8 337 aa26.68■■□□□ 1.86
PREB-206ENST00000444452 LRRC24Q50LG9 513 aa26.67■■□□□ 1.86
PREB-206ENST00000444452 USP48Q86UV5 1035 aa26.67■■□□□ 1.86
PREB-206ENST00000444452 SYAP1Q96A49 352 aaPredicted RBP26.67■■□□□ 1.86
PREB-206ENST00000444452 PLA2G12BQ9BX93 195 aa26.67■■□□□ 1.86
PREB-206ENST00000444452 RRAGDQ9NQL2 400 aaPredicted RBP26.67■■□□□ 1.86
PREB-206ENST00000444452 TAF6LQ9Y6J9 622 aa26.67■■□□□ 1.86
PREB-206ENST00000444452 PLCH1Q4KWH8 1693 aa26.67■■□□□ 1.86
PREB-206ENST00000444452 PCCAP05165 728 aaPredicted RBP26.66■■□□□ 1.86
PREB-206ENST00000444452 PRIM1P49642 420 aaKnown RBP26.66■■□□□ 1.86
PREB-206ENST00000444452 PPP1R9BQ96SB3 815 aa26.66■■□□□ 1.86
PREB-206ENST00000444452 PAG1Q9NWQ8 432 aa26.66■■□□□ 1.86
PREB-206ENST00000444452 SPEF2Q9C093 1822 aa26.66■■□□□ 1.86
PREB-206ENST00000444452 ANP32BQ92688 251 aaKnown RBP26.66■■□□□ 1.86
PREB-206ENST00000444452 ITGB4P16144 1822 aa26.65■■□□□ 1.86
PREB-206ENST00000444452 TIMM10P62072 90 aa26.65■■□□□ 1.86
PREB-206ENST00000444452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.65■■□□□ 1.86
PREB-206ENST00000444452 ZNF594Q96JF6 807 aaPredicted RBP26.65■■□□□ 1.86
PREB-206ENST00000444452 BCL9O00512 1426 aa26.65■■□□□ 1.86
PREB-206ENST00000444452 COL9A3Q14050 684 aaPredicted RBP26.65■■□□□ 1.86
PREB-206ENST00000444452 HELLSQ9NRZ9 838 aa26.65■■□□□ 1.86
PREB-206ENST00000444452 MTMR6Q9Y217 621 aa26.65■■□□□ 1.86
PREB-206ENST00000444452 A0A1B0GUL7 405 aa26.64■■□□□ 1.86
PREB-206ENST00000444452 TOB2Q14106 344 aaPredicted RBP26.64■■□□□ 1.86
PREB-206ENST00000444452 CCDC57Q2TAC2 916 aa26.64■■□□□ 1.86
PREB-206ENST00000444452 FOXD4L6Q3SYB3 417 aaPredicted RBP26.64■■□□□ 1.86
PREB-206ENST00000444452 FOXD4L3Q6VB84 417 aaPredicted RBP26.64■■□□□ 1.86
PREB-206ENST00000444452 GDPD2Q9HCC8 539 aa26.64■■□□□ 1.86
PREB-206ENST00000444452 SYCE3A1L190 88 aa26.63■■□□□ 1.85
PREB-206ENST00000444452 SEC62Q99442 399 aaKnown RBP26.63■■□□□ 1.85
PREB-206ENST00000444452 RBSNQ9H1K0 784 aa26.63■■□□□ 1.85
PREB-206ENST00000444452 MAP3K15Q6ZN16 1313 aa26.63■■□□□ 1.85
PREB-206ENST00000444452 GOLIM4O00461 696 aa26.63■■□□□ 1.85
PREB-206ENST00000444452 NECAB1Q8N987 351 aa26.63■■□□□ 1.85
PREB-206ENST00000444452 ZBTB38Q8NAP3 1195 aaPredicted RBP26.63■■□□□ 1.85
PREB-206ENST00000444452 GADD45BO75293 160 aaPredicted RBP26.62■■□□□ 1.85
PREB-206ENST00000444452 GIGYF2Q6Y7W6 1299 aaKnown RBP26.62■■□□□ 1.85
PREB-206ENST00000444452 CCDC129Q6ZRS4 1044 aa26.62■■□□□ 1.85
PREB-206ENST00000444452 TRIM44Q96DX7 344 aaPredicted RBP26.62■■□□□ 1.85
PREB-206ENST00000444452 CEP126Q9P2H0 1117 aa26.62■■□□□ 1.85
PREB-206ENST00000444452 ZNF330Q9Y3S2 320 aaPredicted RBP26.62■■□□□ 1.85
PREB-206ENST00000444452 CHGBP05060 677 aa26.61■■□□□ 1.85
PREB-206ENST00000444452 NEK1Q96PY6 1258 aa26.61■■□□□ 1.85
PREB-206ENST00000444452 PUS3Q9BZE2 481 aaKnown RBP26.61■■□□□ 1.85
PREB-206ENST00000444452 CNPY2Q9Y2B0 182 aa26.61■■□□□ 1.85
PREB-206ENST00000444452 COL22A1Q8NFW1 1626 aaPredicted RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms