RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IER5Q5VY09 327 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 NBPF11Q86T75 865 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 GAS2L2Q8NHY3 880 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 NGLY1Q96IV0 654 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 CHMP7Q8WUX9 453 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 USP21Q9UK80 565 aa6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 TGFBR3LH3BV60 316 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LGR5O75473 907 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 WFDC12Q8WWY7 111 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LPIN3Q9BQK8 851 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 ZFATQ9P243 1243 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 RAD21O60216 631 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 RASA1P20936 1047 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 INPP5BP32019 993 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 SEC13P55735 322 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 HIF1AQ16665 826 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 RTN1Q16799 776 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 FAM35AQ86V20 835 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 NAP1L5Q96NT1 182 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 CCDC180Q9P1Z9 1646 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 MAP3K6O95382 1288 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 CPB1P15086 417 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 NOS3P29474 1203 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 IREB2P48200 963 aaKnown RBP6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 PERM1Q5SV97 790 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 TFIP11Q9UBB9 837 aaKnown RBP6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 DTWD1Q8N5C7 304 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 IFT43Q96FT9 208 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 FRRS1LQ9P0K9 344 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 RBM19Q9Y4C8 960 aaKnown RBP6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 DEAF1O75398 565 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 CLSTN1O94985 981 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 TTC9Q92623 222 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 MEGF10Q96KG7 1140 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 ZBTB7CA1YPR0 619 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 IDH3AP50213 366 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 MLLT1Q03111 559 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 CRTC2Q53ET0 693 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 KRT25Q7Z3Z0 450 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 HINFPQ9BQA5 517 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 DLL1O00548 723 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 SASH3O75995 380 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 IGFBP4P22692 258 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 PTK7Q13308 1070 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 PCSK7Q16549 785 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 WFDC8Q8IUA0 241 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 OPLAHO14841 1288 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 GPLD1P80108 840 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 DPYDQ12882 1025 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 FLIIQ13045 1269 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 RB1CC1Q8TDY2 1594 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 KRTAP9-9Q9BYP9 154 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 QTRT2Q9H974 415 aaKnown RBP6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 MICAL2O94851 1124 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 DGKZQ13574 1117 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 LARP1Q6PKG0 1096 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 HFE2Q6ZVN8 426 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 DZIP1LQ8IYY4 767 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 C11orf16Q9NQ32 467 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 USP20Q9Y2K6 914 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 ALX3O95076 343 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 RARAP10276 462 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 EPB42P16452 691 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 GLMNQ92990 594 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 WEE1P30291 646 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 ARSDP51689 593 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 TLR7Q9NYK1 1049 aaKnown RBP6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 J3QW42 95 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 NRLP54845 237 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 C11orf91Q3C1V1 193 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 LRFN2Q9ULH4 789 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms