RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZFYVE28Q9HCC9 887 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 C4orf17Q53FE4 359 aa5.9□□□□□ -1.46
CDC42BPA-207ENST00000441725 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
CDC42BPA-207ENST00000441725 BCO2Q9BYV7 579 aa5.9□□□□□ -1.46
CDC42BPA-207ENST00000441725 KBTBD4Q9NVX7 518 aa5.9□□□□□ -1.46
CDC42BPA-207ENST00000441725 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
CDC42BPA-207ENST00000441725 POLR3DP05423 398 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 TCEAL1Q15170 157 aa5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 DHX37Q8IY37 1157 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 SNIP1Q8TAD8 396 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 SPACA7Q96KW9 195 aa5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 KLF16Q9BXK1 252 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 ZFAND3Q9H8U3 227 aa5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 NEUROD4Q9HD90 331 aa5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 KCNMB2Q9Y691 235 aa5.9□□□□□ -1.47
CDC42BPA-207ENST00000441725 TTC24A2A3L6 582 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 PHACTR2O75167 634 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 IER5Q5VY09 327 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 PDE12Q6L8Q7 609 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 CMTR1Q8N1G2 835 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 RASGRP4Q8TDF6 673 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 GPATCH3Q96I76 525 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 SRCIN1Q9C0H9 1055 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 ELP3Q9H9T3 547 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 F6X3S4 739 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 ZIC2O95409 532 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 GTF2E1P29083 439 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 INPP5BP32019 993 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 HIF1AQ16665 826 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 GRIP2Q9C0E4 1043 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 CHRDQ9H2X0 955 aa5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 RTCBQ9Y3I0 505 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-207ENST00000441725 UBAP1LF5GYI3 381 aa5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 ARSDP51689 593 aa5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 NBPF1Q3BBV0 1214 aa5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 GNASQ5JWF2 1037 aa5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 SLC27A3Q5K4L6 730 aa5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 FNDC3AQ9Y2H6 1198 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-207ENST00000441725 EREGO14944 169 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 GADD45BO75293 160 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 PHKA2P46019 1235 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 SPON2Q9BUD6 331 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 ZNF408Q9H9D4 720 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 WASF2Q9Y6W5 498 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 K7ELQ4 463 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 SMPD1P17405 629 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 GRNP28799 593 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 GRM2Q14416 872 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 BTLAQ7Z6A9 289 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 CKAP2LQ8IYA6 745 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 CWC22Q9HCG8 908 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 ZDHHC3Q9NYG2 299 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 ADAMTS1Q9UHI8 967 aa5.87□□□□□ -1.47
CDC42BPA-207ENST00000441725 J3QL48 77 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 AVPP01185 164 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 WDR4P57081 412 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 SERINC3Q13530 473 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 NBPF10Q6P3W6 841 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 GALNT12Q8IXK2 581 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 TRIM56Q9BRZ2 755 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 NOC4LQ9BVI4 516 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 SSBP05455 408 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 ATP4AP20648 1035 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 NFE2L2Q16236 605 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 KIAA0825Q8IV33 1275 aa5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 TTF2Q9UNY4 1162 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-207ENST00000441725 TIMP2P16035 220 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 GPC1P35052 558 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 NASPP49321 788 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 BICDL1Q6ZP65 573 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 CRIPAKQ8N1N5 446 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 C3orf58Q8NDZ4 430 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 GLIS3Q8NEA6 775 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 SEC16BQ96JE7 1060 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 INSM2Q96T92 566 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 SUV39H2Q9H5I1 410 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 MRVI1Q9Y6F6 885 aa5.85□□□□□ -1.47
CDC42BPA-207ENST00000441725 MINDY4BA8MYZ0 360 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 POTECB2RU33 542 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 TATP17735 454 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 GSTT1P30711 240 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 ETFBP38117 255 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 MAP3K10Q02779 954 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 RSRP1Q9BUV0 290 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 RNF144AP50876 292 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 CCDC85BQ15834 202 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 LRRC69Q6ZNQ3 347 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 EAF1Q96JC9 268 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 LATS2Q9NRM7 1088 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 ABI2Q9NYB9 513 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 ANKIB1Q9P2G1 1089 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 EFR3BQ9Y2G0 817 aa5.84□□□□□ -1.47
CDC42BPA-207ENST00000441725 GPC6Q9Y625 555 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms