RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 CCDC158Q5M9N0 1113 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 ZC3H13Q5T200 1668 aaKnown RBP17.74■□□□□ 0.43
SCAP-207ENST00000441517 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 SYNE4Q8N205 404 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 NUP133Q8WUM0 1156 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 OSBPL3Q9H4L5 887 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 CRB1P82279 1406 aa17.74■□□□□ 0.43
SCAP-207ENST00000441517 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 SNAP23O00161 211 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 CBX1P83916 185 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 PTPN21Q16825 1174 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 HIP1O00291 1037 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 PTGS1P23219 599 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 DDIT3P35638 169 aa17.73■□□□□ 0.43
SCAP-207ENST00000441517 ZNF165P49910 485 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
SCAP-207ENST00000441517 NEURL1BA8MQ27 555 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
SCAP-207ENST00000441517 MICU3Q86XE3 530 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 MED14O60244 1454 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 PES1O00541 588 aaKnown RBP17.72■□□□□ 0.43
SCAP-207ENST00000441517 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 TTC6Q86TZ1 520 aa17.72■□□□□ 0.43
SCAP-207ENST00000441517 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 ALDH1L1O75891 902 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 DEPDC5O75140 1603 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
SCAP-207ENST00000441517 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
SCAP-207ENST00000441517 PPLO60437 1756 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
SCAP-207ENST00000441517 LRMPQ12912 555 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 MYL10Q9BUA6 226 aa17.7■□□□□ 0.42
SCAP-207ENST00000441517 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.422e-6■■□□□ 12
SCAP-207ENST00000441517 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 MYO5BQ9ULV0 1848 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 ANKRD1Q15327 319 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 PDILTQ8N807 584 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 FSIP1Q8NA03 581 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
SCAP-207ENST00000441517 TRMT112Q9UI30 125 aaKnown RBP17.69■□□□□ 0.42
SCAP-207ENST00000441517 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
SCAP-207ENST00000441517 SIGLEC1Q9BZZ2 1709 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 A0A1B0GVL5 298 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 CCAR1Q8IX12 1150 aaKnown RBP17.68■□□□□ 0.42
SCAP-207ENST00000441517 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
SCAP-207ENST00000441517 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 MINDY4BA8MYZ0 360 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 PAG1Q9NWQ8 432 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 TYRO3Q06418 890 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
SCAP-207ENST00000441517 TPM2P07951 284 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 VPS37DQ86XT2 251 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 METTL22Q9BUU2 404 aaPredicted RBP17.67■□□□□ 0.42
SCAP-207ENST00000441517 NR1I2O75469 434 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 OFD1O75665 1012 aa17.67■□□□□ 0.42
SCAP-207ENST00000441517 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
SCAP-207ENST00000441517 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
SCAP-207ENST00000441517 CUL4AQ13619 759 aa17.66■□□□□ 0.42
SCAP-207ENST00000441517 SPECC1Q5M775 1068 aa17.66■□□□□ 0.42
SCAP-207ENST00000441517 ZCRB1Q8TBF4 217 aaKnown RBP17.66■□□□□ 0.42
SCAP-207ENST00000441517 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
SCAP-207ENST00000441517 RASSF8Q8NHQ8 419 aa17.66■□□□□ 0.42
SCAP-207ENST00000441517 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
SCAP-207ENST00000441517 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
SCAP-207ENST00000441517 KCNQ4P56696 695 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 CLTCQ00610 1675 aaKnown RBP17.65■□□□□ 0.42
SCAP-207ENST00000441517 PTPDC1A2A3K4 754 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 CMTR1Q8N1G2 835 aaKnown RBP17.65■□□□□ 0.42
SCAP-207ENST00000441517 KIAA1210Q9ULL0 1709 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
SCAP-207ENST00000441517 CYP21A2P08686 494 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 ADORA1P30542 326 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
SCAP-207ENST00000441517 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
SCAP-207ENST00000441517 NPHP3Q7Z494 1330 aa17.65■□□□□ 0.42
SCAP-207ENST00000441517 RAD21O60216 631 aa17.64■□□□□ 0.42
SCAP-207ENST00000441517 CDK11BP21127 795 aaKnown RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms