RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-205	ENST00000440234	NIM1K	Q8IY84	436 aa		28.46	■■■□□ 2.15
RBM38-205	ENST00000440234	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.46	■■■□□ 2.15
RBM38-205	ENST00000440234	SUPT20H	Q8NEM7	779 aa		28.45	■■■□□ 2.14
RBM38-205	ENST00000440234	ZNF428	Q96B54	188 aa		28.45	■■■□□ 2.14
RBM38-205	ENST00000440234		E9PSI1	815 aa		28.44	■■■□□ 2.14
RBM38-205	ENST00000440234	ATP5J2-PTCD1	G3V325	749 aa		28.44	■■■□□ 2.14
RBM38-205	ENST00000440234	AOC3	Q16853	763 aa		28.44	■■■□□ 2.14
RBM38-205	ENST00000440234	ELL2	O00472	640 aa	Predicted RBP	28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	TRIM28	Q13263	835 aa	Known RBP	28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	GRAP	Q13588	217 aa		28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	DPP8	Q6V1X1	898 aa	Predicted RBP	28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	MPND	Q8N594	471 aa		28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	GRAPL	Q8TC17	118 aa	Predicted RBP	28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	FAM89A	Q96GI7	184 aa		28.43	■■■□□ 2.14
RBM38-205	ENST00000440234	LMOD1	P29536	600 aa	Predicted RBP	28.42	■■■□□ 2.14
RBM38-205	ENST00000440234	CNTROB	Q8N137	903 aa		28.42	■■■□□ 2.14
RBM38-205	ENST00000440234	TSR2	Q969E8	191 aa	Known RBP	28.42	■■■□□ 2.14
RBM38-205	ENST00000440234	ANKRD36C	Q5JPF3	1778 aa		28.42	■■■□□ 2.14
RBM38-205	ENST00000440234	FANCI	Q9NVI1	1328 aa		28.42	■■■□□ 2.14
RBM38-205	ENST00000440234	SCNN1D	P51172	638 aa		28.41	■■■□□ 2.14
RBM38-205	ENST00000440234	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.41	■■■□□ 2.14
RBM38-205	ENST00000440234	MKRN1	Q9UHC7	482 aa	Known RBP	28.41	■■■□□ 2.14
RBM38-205	ENST00000440234	EPS15	P42566	896 aa		28.4	■■■□□ 2.14
RBM38-205	ENST00000440234	SF3B3	Q15393	1217 aa	Known RBP	28.4	■■■□□ 2.14
RBM38-205	ENST00000440234	MAP1S	Q66K74	1059 aa	Predicted RBP	28.4	■■■□□ 2.14
RBM38-205	ENST00000440234	TMC4	Q7Z404	712 aa		28.4	■■■□□ 2.14
RBM38-205	ENST00000440234	ZNRF3	Q9ULT6	936 aa		28.4	■■■□□ 2.14
RBM38-205	ENST00000440234	TMEM88B	A6NKF7	163 aa		28.39	■■■□□ 2.14
RBM38-205	ENST00000440234	SLFN5	Q08AF3	891 aa		28.39	■■■□□ 2.14
RBM38-205	ENST00000440234	RIC3	Q7Z5B4	369 aa		28.39	■■■□□ 2.14
RBM38-205	ENST00000440234	C8orf58	Q8NAV2	365 aa		28.39	■■■□□ 2.14
RBM38-205	ENST00000440234	PHAX	Q9H814	394 aa	Known RBP	28.39	■■■□□ 2.14
RBM38-205	ENST00000440234	CXCL9	Q07325	125 aa		28.38	■■■□□ 2.13
RBM38-205	ENST00000440234	COL13A1	Q5TAT6	717 aa	Predicted RBP	28.38	■■■□□ 2.13
RBM38-205	ENST00000440234	HSPA1A	P0DMV8	641 aa	Known RBP	28.37	■■■□□ 2.13
RBM38-205	ENST00000440234	HSPA1B	P0DMV9	641 aa	Known RBP	28.37	■■■□□ 2.13
RBM38-205	ENST00000440234	KIAA2012	Q0VF49	1180 aa		28.37	■■■□□ 2.13
RBM38-205	ENST00000440234	CDCA7L	Q96GN5	454 aa		28.37	■■■□□ 2.13
RBM38-205	ENST00000440234	RTL5	Q5HYW3	569 aa	Predicted RBP	28.36	■■■□□ 2.13
RBM38-205	ENST00000440234	USP50	Q70EL3	339 aa	Predicted RBP	28.36	■■■□□ 2.13
RBM38-205	ENST00000440234	CHMP4A	Q9BY43	222 aa		28.36	■■■□□ 2.13
RBM38-205	ENST00000440234	PCNT	O95613	3336 aa		28.36	■■■□□ 2.13
RBM38-205	ENST00000440234	ADAMTSL1	Q8N6G6	1762 aa		28.35	■■■□□ 2.13
RBM38-205	ENST00000440234	IRS4	O14654	1257 aa	Predicted RBP	28.35	■■■□□ 2.13
RBM38-205	ENST00000440234	CNTNAP1	P78357	1384 aa		28.35	■■■□□ 2.13
RBM38-205	ENST00000440234	CELF1	Q92879	486 aa	Known RBP	28.34	■■■□□ 2.13
RBM38-205	ENST00000440234	LAMB2	P55268	1798 aa		28.34	■■■□□ 2.13
RBM38-205	ENST00000440234	CCDC30	Q5VVM6	783 aa		28.33	■■■□□ 2.13
RBM38-205	ENST00000440234	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.33	■■■□□ 2.13
RBM38-205	ENST00000440234	GPRC5D	Q9NZD1	345 aa		28.33	■■■□□ 2.13
RBM38-205	ENST00000440234	CIAPIN1	Q6FI81	312 aa		28.32	■■■□□ 2.12
RBM38-205	ENST00000440234	EXOSC9	Q06265	439 aa	Known RBP	28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	TRMT2A	Q8IZ69	625 aa	Known RBP	28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	MYD88	Q99836	296 aa		28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	ADARB2	Q9NS39	739 aa	Known RBP	28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	LTBP1	Q14766	1721 aa		28.31	■■■□□ 2.12
RBM38-205	ENST00000440234	HSP90B1	P14625	803 aa	Known RBP	28.3	■■■□□ 2.12
RBM38-205	ENST00000440234	TSPYL6	Q8N831	410 aa		28.3	■■■□□ 2.12
RBM38-205	ENST00000440234	CCDC191	Q8NCU4	936 aa		28.3	■■■□□ 2.12
RBM38-205	ENST00000440234	RAD17	O75943	681 aa		28.29	■■■□□ 2.12
RBM38-205	ENST00000440234	VEGFB	P49765	207 aa		28.29	■■■□□ 2.12
RBM38-205	ENST00000440234	GMPS	P49915	693 aa	Predicted RBP	28.29	■■■□□ 2.12
RBM38-205	ENST00000440234	RPS8	P62241	208 aa	Known RBP	28.29	■■■□□ 2.12
RBM38-205	ENST00000440234	TNIP1	Q15025	636 aa		28.29	■■■□□ 2.12
RBM38-205	ENST00000440234	DDX58	O95786	925 aa	Known RBP	28.28	■■■□□ 2.12
RBM38-205	ENST00000440234	TWISTNB	Q3B726	338 aa	Predicted RBP	28.28	■■■□□ 2.12
RBM38-205	ENST00000440234	METTL22	Q9BUU2	404 aa	Predicted RBP	28.28	■■■□□ 2.12
RBM38-205	ENST00000440234	PCCA	P05165	728 aa	Predicted RBP	28.27	■■■□□ 2.12
RBM38-205	ENST00000440234	WASHC4	Q2M389	1173 aa		28.27	■■■□□ 2.12
RBM38-205	ENST00000440234	DDX60	Q8IY21	1712 aa	Known RBP	28.26	■■■□□ 2.12
RBM38-205	ENST00000440234	RASSF10	A6NK89	507 aa		28.26	■■■□□ 2.11
RBM38-205	ENST00000440234	YDJC	A8MPS7	323 aa		28.26	■■■□□ 2.11
RBM38-205	ENST00000440234	DEFB115	Q30KQ5	88 aa		28.26	■■■□□ 2.11
RBM38-205	ENST00000440234	BCL2L13	Q9BXK5	485 aa		28.26	■■■□□ 2.11
RBM38-205	ENST00000440234	CWC25	Q9NXE8	425 aa	Predicted RBP	28.26	■■■□□ 2.11
RBM38-205	ENST00000440234	TAF1	P21675	1872 aa		28.25	■■■□□ 2.11
RBM38-205	ENST00000440234	CDHR2	Q9BYE9	1310 aa		28.25	■■■□□ 2.11
RBM38-205	ENST00000440234	GPSM2	P81274	684 aa		28.25	■■■□□ 2.11
RBM38-205	ENST00000440234	POLL	Q9UGP5	575 aa		28.25	■■■□□ 2.11
RBM38-205	ENST00000440234	C6orf229	H3BNL8	230 aa		28.24	■■■□□ 2.11
RBM38-205	ENST00000440234	FMR1	Q06787	632 aa	Known RBP eCLIP	28.24	■■■□□ 2.11
RBM38-205	ENST00000440234	MAP3K2	Q9Y2U5	619 aa		28.24	■■■□□ 2.11
RBM38-205	ENST00000440234	RIMBP2	O15034	1052 aa		28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	KSR2	Q6VAB6	950 aa		28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	TNS4	Q8IZW8	715 aa		28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	JARID2	Q92833	1246 aa	Predicted RBP	28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	SEC31B	Q9NQW1	1179 aa		28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	ABT1	Q9ULW3	272 aa	Known RBP	28.23	■■■□□ 2.11
RBM38-205	ENST00000440234	PDE8A	O60658	829 aa		28.22	■■■□□ 2.11
RBM38-205	ENST00000440234	DUOX1	Q9NRD9	1551 aa		28.22	■■■□□ 2.11
RBM38-205	ENST00000440234	PGAP2	Q9UHJ9	254 aa		28.22	■■■□□ 2.11
RBM38-205	ENST00000440234	CNOT7	Q9UIV1	285 aa	Known RBP	28.22	■■■□□ 2.11
RBM38-205	ENST00000440234	PI4KAP2	A4QPH2	592 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	TRAF5	O00463	557 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	CCDC152	Q4G0S7	254 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	PI4KAP1	Q8N8J0	262 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	TBC1D16	Q8TBP0	767 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	EYA3	Q99504	573 aa		28.21	■■■□□ 2.11
RBM38-205	ENST00000440234	STK31	Q9BXU1	1019 aa		28.21	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms