RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TSC1Q92574 1164 aa18.28■□□□□ 0.52
APP-208ENST00000439274 COL15A1P39059 1388 aa18.28■□□□□ 0.52
APP-208ENST00000439274 GCKRQ14397 625 aa18.28■□□□□ 0.52
APP-208ENST00000439274 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
APP-208ENST00000439274 CCDC192P0DO97 292 aa18.27■□□□□ 0.52
APP-208ENST00000439274 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
APP-208ENST00000439274 TAF5LO75529 589 aa18.27■□□□□ 0.52
APP-208ENST00000439274 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
APP-208ENST00000439274 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.52
APP-208ENST00000439274 KCNF1Q9H3M0 494 aa18.27■□□□□ 0.52
APP-208ENST00000439274 ALS2Q96Q42 1657 aa18.27■□□□□ 0.52
APP-208ENST00000439274 JAK2O60674 1132 aa18.26■□□□□ 0.51
APP-208ENST00000439274 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
APP-208ENST00000439274 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
APP-208ENST00000439274 NUP62CLQ9H1M0 184 aa18.26■□□□□ 0.51
APP-208ENST00000439274 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
APP-208ENST00000439274 SLIT3O75094 1523 aa18.26■□□□□ 0.51
APP-208ENST00000439274 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
APP-208ENST00000439274 ANKRD1Q15327 319 aa18.26■□□□□ 0.51
APP-208ENST00000439274 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
APP-208ENST00000439274 PDCP20941 246 aa18.25■□□□□ 0.51
APP-208ENST00000439274 TFCP2Q12800 502 aa18.25■□□□□ 0.51
APP-208ENST00000439274 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
APP-208ENST00000439274 MYRIPQ8NFW9 859 aa18.25■□□□□ 0.51
APP-208ENST00000439274 SEC62Q99442 399 aaKnown RBP18.25■□□□□ 0.51
APP-208ENST00000439274 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
APP-208ENST00000439274 PYCARDQ9ULZ3 195 aa18.25■□□□□ 0.51
APP-208ENST00000439274 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
APP-208ENST00000439274 C5P01031 1676 aa18.25■□□□□ 0.51
APP-208ENST00000439274 LUZP1Q86V48 1076 aa18.25■□□□□ 0.51
APP-208ENST00000439274 TYRO3Q06418 890 aa18.24■□□□□ 0.51
APP-208ENST00000439274 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
APP-208ENST00000439274 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
APP-208ENST00000439274 CCDC9Q9Y3X0 531 aaKnown RBP18.24■□□□□ 0.51
APP-208ENST00000439274 JCADQ9P266 1359 aa18.24■□□□□ 0.51
APP-208ENST00000439274 ELP1O95163 1332 aa18.24■□□□□ 0.51
APP-208ENST00000439274 ZNF496Q96IT1 587 aaPredicted RBP18.24■□□□□ 0.51
APP-208ENST00000439274 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
APP-208ENST00000439274 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
APP-208ENST00000439274 SPTLC3Q9NUV7 552 aa18.24■□□□□ 0.51
APP-208ENST00000439274 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
APP-208ENST00000439274 FAM177BA6PVY3 158 aa18.23■□□□□ 0.51
APP-208ENST00000439274 TNNI3KQ59H18 835 aa18.23■□□□□ 0.51
APP-208ENST00000439274 FAM200AQ8TCP9 573 aa18.23■□□□□ 0.51
APP-208ENST00000439274 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
APP-208ENST00000439274 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
APP-208ENST00000439274 FPGT-TNNI3KV9GXZ4 949 aa18.23■□□□□ 0.51
APP-208ENST00000439274 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
APP-208ENST00000439274 RGPD5Q99666 1765 aa18.23■□□□□ 0.51
APP-208ENST00000439274 RFX5P48382 616 aaPredicted RBP18.23■□□□□ 0.51
APP-208ENST00000439274 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
APP-208ENST00000439274 DDX11Q96FC9 970 aa18.23■□□□□ 0.51
APP-208ENST00000439274 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
APP-208ENST00000439274 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
APP-208ENST00000439274 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
APP-208ENST00000439274 HMG20BQ9P0W2 317 aa18.23■□□□□ 0.51
APP-208ENST00000439274 ERBB3P21860 1342 aa18.23■□□□□ 0.51
APP-208ENST00000439274 GOLGA6L4A6NEF3 574 aa18.22■□□□□ 0.51
APP-208ENST00000439274 ATF3P18847 181 aa18.22■□□□□ 0.51
APP-208ENST00000439274 UBE3BQ7Z3V4 1068 aa18.22■□□□□ 0.51
APP-208ENST00000439274 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
APP-208ENST00000439274 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
APP-208ENST00000439274 MRC1P22897 1456 aa18.22■□□□□ 0.51
APP-208ENST00000439274 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
APP-208ENST00000439274 PTCD1O75127 700 aaKnown RBP18.22■□□□□ 0.51
APP-208ENST00000439274 ATP5JP18859 108 aa18.22■□□□□ 0.51
APP-208ENST00000439274 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
APP-208ENST00000439274 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
APP-208ENST00000439274 DDX17Q92841 729 aaKnown RBP18.22■□□□□ 0.51
APP-208ENST00000439274 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
APP-208ENST00000439274 ZNF609O15014 1411 aa18.22■□□□□ 0.51
APP-208ENST00000439274 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
APP-208ENST00000439274 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.51
APP-208ENST00000439274 ANO6Q4KMQ2 910 aa18.21■□□□□ 0.51
APP-208ENST00000439274 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
APP-208ENST00000439274 Q6ZUG5 572 aa18.21■□□□□ 0.51
APP-208ENST00000439274 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
APP-208ENST00000439274 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
APP-208ENST00000439274 NEK1Q96PY6 1258 aa18.21■□□□□ 0.51
APP-208ENST00000439274 SCAND2PQ9GZW5 306 aaPredicted RBP18.21■□□□□ 0.51
APP-208ENST00000439274 COPRSQ9NQ92 184 aa18.21■□□□□ 0.51
APP-208ENST00000439274 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
APP-208ENST00000439274 BRF1Q92994 677 aa18.21■□□□□ 0.51
APP-208ENST00000439274 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
APP-208ENST00000439274 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
APP-208ENST00000439274 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
APP-208ENST00000439274 NR1I2O75469 434 aa18.2■□□□□ 0.5
APP-208ENST00000439274 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
APP-208ENST00000439274 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
APP-208ENST00000439274 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
APP-208ENST00000439274 PRIMPOLQ96LW4 560 aa18.2■□□□□ 0.5
APP-208ENST00000439274 CBX8Q9HC52 389 aa18.2■□□□□ 0.5
APP-208ENST00000439274 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
APP-208ENST00000439274 CYP21A2P08686 494 aa18.2■□□□□ 0.5
APP-208ENST00000439274 PHKG2P15735 406 aa18.2■□□□□ 0.5
APP-208ENST00000439274 PTGS1P23219 599 aa18.19■□□□□ 0.5
APP-208ENST00000439274 FOSBP53539 338 aa18.19■□□□□ 0.5
APP-208ENST00000439274 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
APP-208ENST00000439274 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
APP-208ENST00000439274 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms