RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PHAXQ9H814 394 aaKnown RBP23.81■■□□□ 1.4
AC004540.1-201ENST00000439120 MRS2Q9HD23 443 aa23.81■■□□□ 1.4
AC004540.1-201ENST00000439120 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
AC004540.1-201ENST00000439120 ZNF316A6NFI3 1004 aaPredicted RBP23.8■■□□□ 1.4
AC004540.1-201ENST00000439120 DDX58O95786 925 aaKnown RBP23.8■■□□□ 1.4
AC004540.1-201ENST00000439120 TRIM28Q13263 835 aaKnown RBP23.8■■□□□ 1.4
AC004540.1-201ENST00000439120 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
AC004540.1-201ENST00000439120 MYD88Q99836 296 aa23.79■■□□□ 1.4
AC004540.1-201ENST00000439120 RTFDC1Q9BY42 306 aaPredicted RBP23.79■■□□□ 1.4
AC004540.1-201ENST00000439120 TAF1P21675 1872 aa23.79■■□□□ 1.4
AC004540.1-201ENST00000439120 IRS4O14654 1257 aaPredicted RBP23.78■■□□□ 1.4
AC004540.1-201ENST00000439120 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
AC004540.1-201ENST00000439120 SF3B3Q15393 1217 aaKnown RBP23.77■■□□□ 1.4
AC004540.1-201ENST00000439120 CCDC27Q2M243 656 aa23.77■■□□□ 1.4
AC004540.1-201ENST00000439120 IFFO2Q5TF58 517 aa23.77■■□□□ 1.4
AC004540.1-201ENST00000439120 ZNRF3Q9ULT6 936 aa23.77■■□□□ 1.4
AC004540.1-201ENST00000439120 ADAMTSL1Q8N6G6 1762 aa23.76■■□□□ 1.39
AC004540.1-201ENST00000439120 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
AC004540.1-201ENST00000439120 ZBTB38Q8NAP3 1195 aaPredicted RBP23.76■■□□□ 1.39
AC004540.1-201ENST00000439120 STK31Q9BXU1 1019 aa23.76■■□□□ 1.39
AC004540.1-201ENST00000439120 SCNN1DP51172 638 aa23.75■■□□□ 1.39
AC004540.1-201ENST00000439120 KIAA2012Q0VF49 1180 aa23.75■■□□□ 1.39
AC004540.1-201ENST00000439120 MAP1SQ66K74 1059 aaPredicted RBP23.75■■□□□ 1.39
AC004540.1-201ENST00000439120 PASKQ96RG2 1323 aa23.75■■□□□ 1.39
AC004540.1-201ENST00000439120 LRRC37AA6NMS7 1700 aa23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 CNTROBQ8N137 903 aa23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 TSPYL6Q8N831 410 aa23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 CCDC191Q8NCU4 936 aa23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 CELF1Q92879 486 aaKnown RBP23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 CWC25Q9NXE8 425 aaPredicted RBP23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 MKRN1Q9UHC7 482 aaKnown RBP23.74■■□□□ 1.39
AC004540.1-201ENST00000439120 LTBP1Q14766 1721 aa23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 TMEM88BA6NKF7 163 aa23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 ITGBL1O95965 494 aaPredicted RBP23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 EPS15P42566 896 aa23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 METTL22Q9BUU2 404 aaPredicted RBP23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 NSFL1CQ9UNZ2 370 aaKnown RBP23.73■■□□□ 1.39
AC004540.1-201ENST00000439120 CXCL9Q07325 125 aa23.72■■□□□ 1.39
AC004540.1-201ENST00000439120 CIAPIN1Q6FI81 312 aa23.72■■□□□ 1.39
AC004540.1-201ENST00000439120 USP50Q70EL3 339 aaPredicted RBP23.72■■□□□ 1.39
AC004540.1-201ENST00000439120 MAP3K2Q9Y2U5 619 aa23.72■■□□□ 1.39
AC004540.1-201ENST00000439120 IL16Q14005 1332 aa23.71■■□□□ 1.39
AC004540.1-201ENST00000439120 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
AC004540.1-201ENST00000439120 TNIP1Q15025 636 aa23.71■■□□□ 1.39
AC004540.1-201ENST00000439120 TWISTNBQ3B726 338 aaPredicted RBP23.71■■□□□ 1.39
AC004540.1-201ENST00000439120 C6orf229H3BNL8 230 aa23.7■■□□□ 1.38
AC004540.1-201ENST00000439120 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
AC004540.1-201ENST00000439120 NEXNQ0ZGT2 675 aa23.7■■□□□ 1.38
AC004540.1-201ENST00000439120 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
AC004540.1-201ENST00000439120 GPRC5DQ9NZD1 345 aa23.7■■□□□ 1.38
AC004540.1-201ENST00000439120 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 RAD17O75943 681 aa23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 WASHC4Q2M389 1173 aa23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 NCBP3Q53F19 620 aaKnown RBP23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 ADARB2Q9NS39 739 aaKnown RBP23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 SALL2Q9Y467 1007 aaPredicted RBP23.69■■□□□ 1.38
AC004540.1-201ENST00000439120 CNTNAP1P78357 1384 aa23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 PI4KAP2A4QPH2 592 aa23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 PDE8AO60658 829 aa23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 HSPA1AP0DMV8 641 aaKnown RBP23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 HSPA1BP0DMV9 641 aaKnown RBP23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 GMPSP49915 693 aaPredicted RBP23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 PI4KAP1Q8N8J0 262 aa23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 EYA3Q99504 573 aa23.68■■□□□ 1.38
AC004540.1-201ENST00000439120 CDHR2Q9BYE9 1310 aa23.67■■□□□ 1.38
AC004540.1-201ENST00000439120 PCNTO95613 3336 aa23.67■■□□□ 1.38
AC004540.1-201ENST00000439120 GPSM2P81274 684 aa23.67■■□□□ 1.38
AC004540.1-201ENST00000439120 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
AC004540.1-201ENST00000439120 RIMBP2O15034 1052 aa23.66■■□□□ 1.38
AC004540.1-201ENST00000439120 SEC31BQ9NQW1 1179 aa23.66■■□□□ 1.38
AC004540.1-201ENST00000439120 SLC4A2P04920 1241 aa23.65■■□□□ 1.38
AC004540.1-201ENST00000439120 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
AC004540.1-201ENST00000439120 ANKIB1Q9P2G1 1089 aa23.65■■□□□ 1.38
AC004540.1-201ENST00000439120 ABT1Q9ULW3 272 aaKnown RBP23.65■■□□□ 1.38
AC004540.1-201ENST00000439120 FANCIQ9NVI1 1328 aa23.64■■□□□ 1.38
AC004540.1-201ENST00000439120 COL4A1P02462 1669 aa23.64■■□□□ 1.38
AC004540.1-201ENST00000439120 DBNDD1Q9H9R9 158 aa23.64■■□□□ 1.37
AC004540.1-201ENST00000439120 POLLQ9UGP5 575 aa23.64■■□□□ 1.37
AC004540.1-201ENST00000439120 YDJCA8MPS7 323 aa23.63■■□□□ 1.37
AC004540.1-201ENST00000439120 G3V3G9 751 aa23.63■■□□□ 1.37
AC004540.1-201ENST00000439120 DCAF8Q5TAQ9 597 aa23.63■■□□□ 1.37
AC004540.1-201ENST00000439120 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
AC004540.1-201ENST00000439120 ANKRD18AQ8IVF6 992 aa23.62■■□□□ 1.37
AC004540.1-201ENST00000439120 TBC1D16Q8TBP0 767 aa23.62■■□□□ 1.37
AC004540.1-201ENST00000439120 ZC3H12CQ9C0D7 883 aaKnown RBP23.62■■□□□ 1.37
AC004540.1-201ENST00000439120 H7C1D1 291 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 ECE2O60344 883 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 UFL1O94874 794 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 IGKV5-2P06315 115 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 VEGFBP49765 207 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 CTSWP56202 376 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 DEFB115Q30KQ5 88 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 COL13A1Q5TAT6 717 aaPredicted RBP23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 G2E3Q7L622 706 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 FAM9BQ8IZU0 186 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 CDC5LQ99459 802 aaKnown RBP23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms