RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RTFDC1Q9BY42 306 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-204ENST00000438571 MYH3P11055 1940 aa23.66■■□□□ 1.38
GTF3A-204ENST00000438571 APAF1O14727 1248 aa23.65■■□□□ 1.38
GTF3A-204ENST00000438571 ZNF853P0CG23 659 aa23.65■■□□□ 1.38
GTF3A-204ENST00000438571 DPP8Q6V1X1 898 aaPredicted RBP23.65■■□□□ 1.38
GTF3A-204ENST00000438571 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
GTF3A-204ENST00000438571 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
GTF3A-204ENST00000438571 TNS4Q8IZW8 715 aa23.65■■□□□ 1.38
GTF3A-204ENST00000438571 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
GTF3A-204ENST00000438571 DBF4Q9UBU7 674 aaPredicted RBP23.65■■□□□ 1.38
GTF3A-204ENST00000438571 CXCL9Q07325 125 aa23.64■■□□□ 1.37
GTF3A-204ENST00000438571 RTL5Q5HYW3 569 aaPredicted RBP23.64■■□□□ 1.37
GTF3A-204ENST00000438571 ANKRD13DQ6ZTN6 518 aa23.64■■□□□ 1.37
GTF3A-204ENST00000438571 MPNDQ8N594 471 aa23.64■■□□□ 1.37
GTF3A-204ENST00000438571 FOXN1O15353 648 aa23.63■■□□□ 1.37
GTF3A-204ENST00000438571 CAPN15O75808 1086 aa23.63■■□□□ 1.37
GTF3A-204ENST00000438571 BBOX1O75936 387 aa23.63■■□□□ 1.37
GTF3A-204ENST00000438571 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
GTF3A-204ENST00000438571 PSME4Q14997 1843 aa23.62■■□□□ 1.37
GTF3A-204ENST00000438571 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
GTF3A-204ENST00000438571 PHAXQ9H814 394 aaKnown RBP23.62■■□□□ 1.37
GTF3A-204ENST00000438571 YDJCA8MPS7 323 aa23.61■■□□□ 1.37
GTF3A-204ENST00000438571 ELL2O00472 640 aaPredicted RBP23.61■■□□□ 1.37
GTF3A-204ENST00000438571 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
GTF3A-204ENST00000438571 SUPT20HQ8NEM7 779 aa23.61■■□□□ 1.37
GTF3A-204ENST00000438571 GPRC5DQ9NZD1 345 aa23.61■■□□□ 1.37
GTF3A-204ENST00000438571 ZNRF3Q9ULT6 936 aa23.61■■□□□ 1.37
GTF3A-204ENST00000438571 TRAF5O00463 557 aa23.6■■□□□ 1.37
GTF3A-204ENST00000438571 GMPSP49915 693 aaPredicted RBP23.6■■□□□ 1.37
GTF3A-204ENST00000438571 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
GTF3A-204ENST00000438571 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
GTF3A-204ENST00000438571 HYPKQ9NX55 129 aa23.6■■□□□ 1.37
GTF3A-204ENST00000438571 SHTN1A0MZ66 631 aa23.59■■□□□ 1.37
GTF3A-204ENST00000438571 RASSF10A6NK89 507 aa23.59■■□□□ 1.37
GTF3A-204ENST00000438571 RAD17O75943 681 aa23.59■■□□□ 1.37
GTF3A-204ENST00000438571 USP50Q70EL3 339 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-204ENST00000438571 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
GTF3A-204ENST00000438571 IFT57Q9NWB7 429 aa23.58■■□□□ 1.37
GTF3A-204ENST00000438571 DEFB115Q30KQ5 88 aa23.57■■□□□ 1.36
GTF3A-204ENST00000438571 CIAPIN1Q6FI81 312 aa23.57■■□□□ 1.36
GTF3A-204ENST00000438571 C8orf58Q8NAV2 365 aa23.57■■□□□ 1.36
GTF3A-204ENST00000438571 ADARB2Q9NS39 739 aaKnown RBP23.57■■□□□ 1.36
GTF3A-204ENST00000438571 ABT1Q9ULW3 272 aaKnown RBP23.57■■□□□ 1.36
GTF3A-204ENST00000438571 IRS4O14654 1257 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-204ENST00000438571 GPR101Q96P66 508 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-204ENST00000438571 GNAI1P63096 354 aa23.55■■□□□ 1.36
GTF3A-204ENST00000438571 CST9Q5W186 159 aa23.55■■□□□ 1.36
GTF3A-204ENST00000438571 RIC3Q7Z5B4 369 aa23.55■■□□□ 1.36
GTF3A-204ENST00000438571 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
GTF3A-204ENST00000438571 MYD88Q99836 296 aa23.55■■□□□ 1.36
GTF3A-204ENST00000438571 ZNF646O15015 1829 aaPredicted RBP23.54■■□□□ 1.36
GTF3A-204ENST00000438571 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
GTF3A-204ENST00000438571 GPSM2P81274 684 aa23.54■■□□□ 1.36
GTF3A-204ENST00000438571 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
GTF3A-204ENST00000438571 TRIM28Q13263 835 aaKnown RBP23.54■■□□□ 1.36
GTF3A-204ENST00000438571 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
GTF3A-204ENST00000438571 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
GTF3A-204ENST00000438571 DBNDD1Q9H9R9 158 aa23.54■■□□□ 1.36
GTF3A-204ENST00000438571 POLLQ9UGP5 575 aa23.54■■□□□ 1.36
GTF3A-204ENST00000438571 WDR33Q9C0J8 1336 aaKnown RBP23.54■■□□□ 1.36
GTF3A-204ENST00000438571 TMC4Q7Z404 712 aa23.53■■□□□ 1.36
GTF3A-204ENST00000438571 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
GTF3A-204ENST00000438571 SEC31BQ9NQW1 1179 aa23.53■■□□□ 1.36
GTF3A-204ENST00000438571 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
GTF3A-204ENST00000438571 ZBTB12Q9Y330 459 aaPredicted RBP23.53■■□□□ 1.36
GTF3A-204ENST00000438571 CACNA1FO60840 1977 aa23.52■■□□□ 1.36
GTF3A-204ENST00000438571 RIMBP2O15034 1052 aa23.52■■□□□ 1.36
GTF3A-204ENST00000438571 BCL2L13Q9BXK5 485 aa23.52■■□□□ 1.36
GTF3A-204ENST00000438571 WBP1LQ9NX94 342 aa23.52■■□□□ 1.36
GTF3A-204ENST00000438571 CYP4F22Q6NT55 531 aa23.51■■□□□ 1.35
GTF3A-204ENST00000438571 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
GTF3A-204ENST00000438571 GRM1Q13255 1194 aa23.5■■□□□ 1.35
GTF3A-204ENST00000438571 ZBTB38Q8NAP3 1195 aaPredicted RBP23.5■■□□□ 1.35
GTF3A-204ENST00000438571 CCDC85AQ96PX6 553 aaPredicted RBP23.5■■□□□ 1.35
GTF3A-204ENST00000438571 KCNQ5Q9NR82 932 aa23.5■■□□□ 1.35
GTF3A-204ENST00000438571 CDHR2Q9BYE9 1310 aa23.5■■□□□ 1.35
GTF3A-204ENST00000438571 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
GTF3A-204ENST00000438571 C6orf229H3BNL8 230 aa23.49■■□□□ 1.35
GTF3A-204ENST00000438571 PSMD14O00487 310 aa23.49■■□□□ 1.35
GTF3A-204ENST00000438571 CALD1Q05682 793 aaKnown RBP23.49■■□□□ 1.35
GTF3A-204ENST00000438571 TNIP1Q15025 636 aa23.49■■□□□ 1.35
GTF3A-204ENST00000438571 WASHC4Q2M389 1173 aa23.49■■□□□ 1.35
GTF3A-204ENST00000438571 PAXIP1Q6ZW49 1069 aaPredicted RBP23.49■■□□□ 1.35
GTF3A-204ENST00000438571 AIDAQ96BJ3 306 aa23.49■■□□□ 1.35
GTF3A-204ENST00000438571 CNOT7Q9UIV1 285 aaKnown RBP23.49■■□□□ 1.35
GTF3A-204ENST00000438571 EGFRP00533 1210 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 LBX1P52954 281 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 DOK7Q18PE1 504 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 DLK2Q6UY11 383 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 MICALL2Q8IY33 904 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 CAPNS2Q96L46 248 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 TLL2Q9Y6L7 1015 aa23.48■■□□□ 1.35
GTF3A-204ENST00000438571 ECE2O60344 883 aa23.47■■□□□ 1.35
GTF3A-204ENST00000438571 HSPA8P11142 646 aaKnown RBP23.47■■□□□ 1.35
GTF3A-204ENST00000438571 CTCFP49711 727 aaPredicted RBP23.47■■□□□ 1.35
GTF3A-204ENST00000438571 RPS8P62241 208 aaKnown RBP23.47■■□□□ 1.35
GTF3A-204ENST00000438571 TBC1D16Q8TBP0 767 aa23.47■■□□□ 1.35
GTF3A-204ENST00000438571 PGAP2Q9UHJ9 254 aa23.47■■□□□ 1.35
GTF3A-204ENST00000438571 A0A1B0GUL6 1792 aa23.47■■□□□ 1.35
GTF3A-204ENST00000438571 CELF2O95319 508 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms