RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ECM1Q16610 540 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ABTB2Q8N961 1025 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 CCER1Q8TC90 406 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 SIN3BO75182 1162 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 ABL1P00519 1130 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 EPXP11678 715 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 CCINQ13939 588 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 CMTR1Q8N1G2 835 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 EDARADDQ8WWZ3 215 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 BHMTQ93088 406 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 C11orf16Q9NQ32 467 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 ZFATQ9P243 1243 aa6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 GNEQ9Y223 722 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-204ENST00000438419 EGFRP00533 1210 aa6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 NOM1Q5C9Z4 860 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 EGFL7Q9UHF1 273 aa6.74□□□□□ -1.33
TRAPPC13-204ENST00000438419 ICMTO60725 284 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 XYLBO75191 536 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 SASH3O75995 380 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 NFKB1P19838 968 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 SF3B2Q13435 895 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 AEBP1Q8IUX7 1158 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-204ENST00000438419 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
TRAPPC13-204ENST00000438419 HOXB4P17483 251 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-204ENST00000438419 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
TRAPPC13-204ENST00000438419 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
TRAPPC13-204ENST00000438419 BTBD6Q96KE9 485 aa6.72□□□□□ -1.33
TRAPPC13-204ENST00000438419 FAM13AO94988 1023 aa6.71□□□□□ -1.34
TRAPPC13-204ENST00000438419 MAP3K6O95382 1288 aa6.71□□□□□ -1.34
TRAPPC13-204ENST00000438419 NEUROD1Q13562 356 aa6.71□□□□□ -1.34
TRAPPC13-204ENST00000438419 EDEM1Q92611 657 aa6.71□□□□□ -1.34
TRAPPC13-204ENST00000438419 NUDT16Q96DE0 195 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-204ENST00000438419 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 FZD6O60353 706 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 PNMA5Q96PV4 448 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 FAM13BQ9NYF5 915 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 IVNS1ABPQ9Y6Y0 642 aa6.7□□□□□ -1.34
TRAPPC13-204ENST00000438419 ZBTB42B2RXF5 422 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 UBAP1LF5GYI3 381 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 H3BRB1 525 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 PDGFAP04085 211 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 RARAP10276 462 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 MZF1P28698 734 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 SNRPNP63162 240 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 ARHGAP4P98171 946 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 ALKBH2Q6NS38 261 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 CHSY3Q70JA7 882 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 NEDD1Q8NHV4 660 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 GGNBP2Q9H3C7 697 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 TUT1Q9H6E5 874 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
TRAPPC13-204ENST00000438419 ZBTB7CA1YPR0 619 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 MMP20O60882 483 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 ADH7P40394 386 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 DHX32Q7L7V1 743 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 NLRP13Q86W25 1043 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 IGFLR1Q9H665 355 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 DNAJB12Q9NXW2 375 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 POLIQ9UNA4 740 aa6.68□□□□□ -1.34
TRAPPC13-204ENST00000438419 A6NHS1 94 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 SOWAHDA6NJG2 315 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 GLYCTKQ8IVS8 523 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 UBE2OQ9C0C9 1292 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 TLR7Q9NYK1 1049 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 SLC6A14Q9UN76 642 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 ALAS2P22557 587 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 DGKGP49619 791 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 TBC1D8BQ0IIM8 1120 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 LINC00114Q6XXX2 140 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 GOLGA2P5Q9HBQ8 144 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 NAGPAQ9UK23 515 aa6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 FNDC3AQ9Y2H6 1198 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-204ENST00000438419 AMPD1P23109 780 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 AAMPQ13685 434 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 ELP3Q9H9T3 547 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 TMEM63CQ9P1W3 806 aa6.66□□□□□ -1.34
TRAPPC13-204ENST00000438419 ALBP02768 609 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 HOXD8P13378 290 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 NRLP54845 237 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms