RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 DPEP1P16444 411 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 METTL22Q9BUU2 404 aaPredicted RBP13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 GLRX3O76003 335 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 NUCB2P80303 420 aa13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 SKOR2Q2VWA4 1001 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-207ENST00000438317 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 CLEC17AQ6ZS10 378 aa13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
ERGIC3-207ENST00000438317 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 COPS6Q7L5N1 327 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 PI4K2BQ8TCG2 481 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 XAGE3Q8WTP9 111 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
ERGIC3-207ENST00000438317 COL15A1P39059 1388 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 CD2BP2O95400 341 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 GYS1P13807 737 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 GCKRQ14397 625 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
ERGIC3-207ENST00000438317 NEURL1BA8MQ27 555 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 GOLGA6L22H0YM25 854 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 HIP1O00291 1037 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
ERGIC3-207ENST00000438317 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 TRAK2O60296 914 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 IGKV5-2P06315 115 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 MYL6BP14649 208 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 KIAA1211Q6ZU35 1233 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 SUCLG2Q96I99 432 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
ERGIC3-207ENST00000438317 SGSM2O43147 1006 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 NEK4P51957 841 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 TSHZ3Q63HK5 1081 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 LRP10Q7Z4F1 713 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 MYD88Q99836 296 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 PIM2Q9P1W9 311 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 SBF1O95248 1867 aa13.35□□□□□ -0.27
ERGIC3-207ENST00000438317 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 ADRA2BP18089 450 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 HSPA4P34932 840 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-207ENST00000438317 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.28
ERGIC3-207ENST00000438317 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-207ENST00000438317 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
ERGIC3-207ENST00000438317 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 SASH1O94885 1247 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 RFC4P35249 363 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 DALRD3Q5D0E6 543 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 AACSQ86V21 672 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 DIAPH3Q9NSV4 1193 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
ERGIC3-207ENST00000438317 CHRNA5P30532 468 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms