RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 DALRD3Q5D0E6 543 aaKnown RBP14.45□□□□□ -0.1
SNHG3-202ENST00000437681 TCERG1O14776 1098 aaKnown RBP14.45□□□□□ -0.1
SNHG3-202ENST00000437681 BCAR3O75815 825 aa14.45□□□□□ -0.1
SNHG3-202ENST00000437681 DPEP1P16444 411 aa14.45□□□□□ -0.1
SNHG3-202ENST00000437681 CTSWP56202 376 aa14.45□□□□□ -0.1
SNHG3-202ENST00000437681 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
SNHG3-202ENST00000437681 LTBP1Q14766 1721 aa14.44□□□□□ -0.1
SNHG3-202ENST00000437681 C9orf78Q9NZ63 289 aaPredicted RBP14.44□□□□□ -0.1
SNHG3-202ENST00000437681 F6X3S4 739 aa14.43□□□□□ -0.1
SNHG3-202ENST00000437681 MTX1Q13505 466 aa14.43□□□□□ -0.1
SNHG3-202ENST00000437681 GRAPQ13588 217 aa14.43□□□□□ -0.1
SNHG3-202ENST00000437681 GRAPLQ8TC17 118 aaPredicted RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 ZBTB22O15209 634 aa14.43□□□□□ -0.1
SNHG3-202ENST00000437681 CWF19L2Q2TBE0 894 aaKnown RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 CDC5LQ99459 802 aaKnown RBP14.43□□□□□ -0.1
SNHG3-202ENST00000437681 SNED1Q8TER0 1413 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 USP44Q9H0E7 712 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 A0A1B0GUL6 1792 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 SP8Q8IXZ3 490 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 FTSJ3Q8IY81 847 aaKnown RBP14.42□□□□□ -0.1
SNHG3-202ENST00000437681 FAM89AQ96GI7 184 aa14.42□□□□□ -0.1
SNHG3-202ENST00000437681 SLX4Q8IY92 1834 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 FOXO4P98177 505 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 RTKN2Q8IZC4 609 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 TTLL11Q8NHH1 800 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 C7orf43Q8WVR3 580 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 BCL2L13Q9BXK5 485 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 CACNA1SQ13698 1873 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 SLC4A10Q6U841 1118 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 CHD4Q14839 1912 aa14.41□□□□□ -0.1
SNHG3-202ENST00000437681 UBE3BQ7Z3V4 1068 aa14.4□□□□□ -0.1
SNHG3-202ENST00000437681 NLGN2Q8NFZ4 835 aa14.4□□□□□ -0.1
SNHG3-202ENST00000437681 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
SNHG3-202ENST00000437681 SUPT20HQ8NEM7 779 aa14.4□□□□□ -0.1
SNHG3-202ENST00000437681 PSMD1Q99460 953 aa14.4□□□□□ -0.1
SNHG3-202ENST00000437681 ATP6V0A2Q9Y487 856 aa14.4□□□□□ -0.1
SNHG3-202ENST00000437681 RRP1P56182 461 aaKnown RBP14.39□□□□□ -0.11
SNHG3-202ENST00000437681 MVPQ14764 893 aaKnown RBP14.39□□□□□ -0.11
SNHG3-202ENST00000437681 RTFDC1Q9BY42 306 aaPredicted RBP14.39□□□□□ -0.11
SNHG3-202ENST00000437681 TMX4Q9H1E5 349 aaPredicted RBP14.39□□□□□ -0.11
SNHG3-202ENST00000437681 CCDC93Q567U6 631 aa14.39□□□□□ -0.11
SNHG3-202ENST00000437681 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
SNHG3-202ENST00000437681 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
SNHG3-202ENST00000437681 BSDC1Q9NW68 430 aaPredicted RBP14.38□□□□□ -0.11
SNHG3-202ENST00000437681 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
SNHG3-202ENST00000437681 GNAI2P04899 355 aa14.38□□□□□ -0.11
SNHG3-202ENST00000437681 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
SNHG3-202ENST00000437681 ANKRD18BA2A2Z9 1011 aa14.37□□□□□ -0.11
SNHG3-202ENST00000437681 ZBTB7BO15156 539 aaPredicted RBP14.37□□□□□ -0.11
SNHG3-202ENST00000437681 HCLS1P14317 486 aaPredicted RBP14.37□□□□□ -0.11
SNHG3-202ENST00000437681 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
SNHG3-202ENST00000437681 SBF1O95248 1867 aa14.37□□□□□ -0.11
SNHG3-202ENST00000437681 CHRNA5P30532 468 aa14.37□□□□□ -0.11
SNHG3-202ENST00000437681 RPS8P62241 208 aaKnown RBP14.36□□□□□ -0.11
SNHG3-202ENST00000437681 ANKRD18AQ8IVF6 992 aa14.36□□□□□ -0.11
SNHG3-202ENST00000437681 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
SNHG3-202ENST00000437681 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
SNHG3-202ENST00000437681 ANKRD2Q9GZV1 360 aa14.36□□□□□ -0.11
SNHG3-202ENST00000437681 CIAO1O76071 339 aa14.36□□□□□ -0.11
SNHG3-202ENST00000437681 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNHG3-202ENST00000437681 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
SNHG3-202ENST00000437681 IGHMBP2P38935 993 aaKnown RBP14.35□□□□□ -0.11
SNHG3-202ENST00000437681 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
SNHG3-202ENST00000437681 C15orf52Q6ZUT6 534 aaKnown RBP14.35□□□□□ -0.11
SNHG3-202ENST00000437681 KAZALD1Q96I82 304 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 SPEF2Q9C093 1822 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 ARAP2Q8WZ64 1704 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 FAM177BA6PVY3 158 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNHG3-202ENST00000437681 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 ZNF609O15014 1411 aa14.35□□□□□ -0.11
SNHG3-202ENST00000437681 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
SNHG3-202ENST00000437681 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
SNHG3-202ENST00000437681 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
SNHG3-202ENST00000437681 MROH5Q6ZUA9 1318 aa14.33□□□□□ -0.11
SNHG3-202ENST00000437681 PSME4Q14997 1843 aa14.33□□□□□ -0.11
SNHG3-202ENST00000437681 COPRSQ9NQ92 184 aa14.33□□□□□ -0.11
SNHG3-202ENST00000437681 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.11
SNHG3-202ENST00000437681 ITGA6P23229 1130 aa14.33□□□□□ -0.12
SNHG3-202ENST00000437681 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
SNHG3-202ENST00000437681 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
SNHG3-202ENST00000437681 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
SNHG3-202ENST00000437681 TIAM2Q8IVF5 1701 aa14.33□□□□□ -0.12
SNHG3-202ENST00000437681 DUOX1Q9NRD9 1551 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 ATP2B4P23634 1241 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 GPR162Q16538 588 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 LMBR1LQ6UX01 489 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 GREM2Q9H772 168 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNHG3-202ENST00000437681 MMP14P50281 582 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 ATP8B2P98198 1209 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 POLA2Q14181 598 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 EYA3Q99504 573 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 MEIS3Q99687 375 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms