RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 RAD50Q92878 1312 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 LDHCP07864 332 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
NOD1-206ENST00000434755 ZNF287Q9HBT7 754 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
NOD1-206ENST00000434755 RXRBP28702 533 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
NOD1-206ENST00000434755 ANKIB1Q9P2G1 1089 aa12.56□□□□□ -0.4
NOD1-206ENST00000434755 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
NOD1-206ENST00000434755 MYOM1P52179 1685 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 GNPATO15228 680 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 VPS72Q15906 364 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
NOD1-206ENST00000434755 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
NOD1-206ENST00000434755 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 PDE8AO60658 829 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
NOD1-206ENST00000434755 POLD1P28340 1107 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 SIK1P57059 783 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
NOD1-206ENST00000434755 IQSEC3Q9UPP2 1182 aaPredicted RBP12.54□□□□□ -0.4
NOD1-206ENST00000434755 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
NOD1-206ENST00000434755 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
NOD1-206ENST00000434755 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 XBP1P17861 261 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 GCKRQ14397 625 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
NOD1-206ENST00000434755 HOOK1Q9UJC3 728 aaKnown RBP12.53□□□□□ -0.4
NOD1-206ENST00000434755 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
NOD1-206ENST00000434755 ZNF142P52746 1687 aaPredicted RBP12.53□□□□□ -0.4
NOD1-206ENST00000434755 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.4
NOD1-206ENST00000434755 ATP2B3Q16720 1220 aa12.52□□□□□ -0.4
NOD1-206ENST00000434755 FERMT3Q86UX7 667 aa12.52□□□□□ -0.4
NOD1-206ENST00000434755 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
NOD1-206ENST00000434755 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
NOD1-206ENST00000434755 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
NOD1-206ENST00000434755 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
NOD1-206ENST00000434755 G2E3Q7L622 706 aa12.52□□□□□ -0.41
NOD1-206ENST00000434755 AFF2P51816 1311 aa12.52□□□□□ -0.41
NOD1-206ENST00000434755 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
NOD1-206ENST00000434755 A1BGP04217 495 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 CASTP20810 708 aaKnown RBP12.51□□□□□ -0.41
NOD1-206ENST00000434755 GSTO1P78417 241 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 GOLIM4O00461 696 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 TPM3P06753 285 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
NOD1-206ENST00000434755 MAP3K15Q6ZN16 1313 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 CYP27B1O15528 508 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
NOD1-206ENST00000434755 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
NOD1-206ENST00000434755 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
NOD1-206ENST00000434755 CDKL5O76039 1030 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 EYA3Q99504 573 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 KRT85P78386 507 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 COL3A1P02461 1466 aaPredicted RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
NOD1-206ENST00000434755 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
NOD1-206ENST00000434755 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
NOD1-206ENST00000434755 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 EYA2O00167 538 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 SEPT12Q8IYM1 358 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 APBA3O96018 575 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 TICAM2Q86XR7 235 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 MPNDQ8N594 471 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
NOD1-206ENST00000434755 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
NOD1-206ENST00000434755 STK38Q15208 465 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
NOD1-206ENST00000434755 HELBQ8NG08 1087 aaPredicted RBP12.49□□□□□ -0.41
NOD1-206ENST00000434755 USP26Q9BXU7 913 aa12.49□□□□□ -0.41
NOD1-206ENST00000434755 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
NOD1-206ENST00000434755 BAG3O95817 575 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms