RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 TOB2Q14106 344 aaPredicted RBP29.71■■■□□ 2.35
LMBR1-209ENST00000434453 TSGA10IPQ3SY00 556 aa29.71■■■□□ 2.35
LMBR1-209ENST00000434453 NDUFB9Q9Y6M9 179 aa29.71■■■□□ 2.35
LMBR1-209ENST00000434453 TNS3Q68CZ2 1445 aa29.7■■■□□ 2.35
LMBR1-209ENST00000434453 RNF20Q5VTR2 975 aa29.7■■■□□ 2.35
LMBR1-209ENST00000434453 BLOC1S2Q6QNY1 142 aa29.7■■■□□ 2.35
LMBR1-209ENST00000434453 ALDH8A1Q9H2A2 487 aaPredicted RBP29.7■■■□□ 2.35
LMBR1-209ENST00000434453 PARP4Q9UKK3 1724 aaKnown RBP29.69■■■□□ 2.34
LMBR1-209ENST00000434453 VPS37CA5D8V6 355 aaPredicted RBP29.69■■■□□ 2.34
LMBR1-209ENST00000434453 CHGBP05060 677 aa29.69■■■□□ 2.34
LMBR1-209ENST00000434453 USPL1Q5W0Q7 1092 aa29.69■■■□□ 2.34
LMBR1-209ENST00000434453 DCCP43146 1447 aa29.69■■■□□ 2.34
LMBR1-209ENST00000434453 CCDC39Q9UFE4 941 aa29.69■■■□□ 2.34
LMBR1-209ENST00000434453 A0A087WZG4 1122 aa29.68■■■□□ 2.34
LMBR1-209ENST00000434453 CABP4P57796 275 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 FAM184AQ8NB25 1140 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 PLBD2Q8NHP8 589 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 DBNDD2Q9BQY9 259 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 HMG20BQ9P0W2 317 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 ZNF609O15014 1411 aa29.67■■■□□ 2.34
LMBR1-209ENST00000434453 LARP1BQ659C4 914 aaKnown RBP29.66■■■□□ 2.34
LMBR1-209ENST00000434453 CDC37L1Q7L3B6 337 aa29.66■■■□□ 2.34
LMBR1-209ENST00000434453 FUCA2Q9BTY2 467 aa29.66■■■□□ 2.34
LMBR1-209ENST00000434453 NBPF26B4DH59 902 aa29.65■■■□□ 2.34
LMBR1-209ENST00000434453 LETM1O95202 739 aaPredicted RBP29.65■■■□□ 2.34
LMBR1-209ENST00000434453 MCM5P33992 734 aa29.65■■■□□ 2.34
LMBR1-209ENST00000434453 UVSSAQ2YD98 709 aa29.65■■■□□ 2.34
LMBR1-209ENST00000434453 NBPF14Q5TI25 921 aa29.65■■■□□ 2.34
LMBR1-209ENST00000434453 NBPF10Q6P3W6 841 aaKnown RBP29.65■■■□□ 2.34
LMBR1-209ENST00000434453 NBPF15Q8N660 670 aa29.65■■■□□ 2.34
LMBR1-209ENST00000434453 ANKRD1Q15327 319 aa29.64■■■□□ 2.34
LMBR1-209ENST00000434453 NUP188Q5SRE5 1749 aa29.64■■■□□ 2.34
LMBR1-209ENST00000434453 HCLS1P14317 486 aaPredicted RBP29.64■■■□□ 2.33
LMBR1-209ENST00000434453 CPDO75976 1380 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 RFX7Q2KHR2 1363 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 SPATA31A3Q5VYP0 1347 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 CSPP1Q1MSJ5 1256 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.63■■■□□ 2.33
LMBR1-209ENST00000434453 SEC62Q99442 399 aaKnown RBP29.63■■■□□ 2.33
LMBR1-209ENST00000434453 HAUS7Q99871 368 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 FOXO4P98177 505 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 LMBR1LQ6UX01 489 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 CCDC129Q6ZRS4 1044 aa29.63■■■□□ 2.33
LMBR1-209ENST00000434453 TJP1Q07157 1748 aa29.62■■■□□ 2.33
LMBR1-209ENST00000434453 UBR2Q8IWV8 1755 aa29.62■■■□□ 2.33
LMBR1-209ENST00000434453 GIMAP6Q6P9H5 292 aa29.61■■■□□ 2.33
LMBR1-209ENST00000434453 TTC6Q86TZ1 520 aa29.61■■■□□ 2.33
LMBR1-209ENST00000434453 FERMT3Q86UX7 667 aa29.61■■■□□ 2.33
LMBR1-209ENST00000434453 DNAJC2Q99543 621 aaKnown RBP29.61■■■□□ 2.33
LMBR1-209ENST00000434453 FAM173BQ6P4H8 233 aa29.61■■■□□ 2.33
LMBR1-209ENST00000434453 H7C1W4 665 aa29.6■■■□□ 2.33
LMBR1-209ENST00000434453 USP25Q9UHP3 1055 aa29.6■■■□□ 2.33
LMBR1-209ENST00000434453 LAMA4Q16363 1823 aa29.6■■■□□ 2.33
LMBR1-209ENST00000434453 ATG9AQ7Z3C6 839 aa29.59■■■□□ 2.33
LMBR1-209ENST00000434453 TTLL7Q6ZT98 887 aa29.59■■■□□ 2.33
LMBR1-209ENST00000434453 DDX46Q7L014 1031 aaKnown RBP29.59■■■□□ 2.33
LMBR1-209ENST00000434453 TPM2P07951 284 aa29.58■■■□□ 2.33
LMBR1-209ENST00000434453 PDIA4P13667 645 aaKnown RBP29.58■■■□□ 2.33
LMBR1-209ENST00000434453 PDCP20941 246 aa29.58■■■□□ 2.33
LMBR1-209ENST00000434453 STK3Q13188 491 aa29.58■■■□□ 2.33
LMBR1-209ENST00000434453 CYP21A2P08686 494 aa29.57■■■□□ 2.32
LMBR1-209ENST00000434453 KRT32Q14532 448 aa29.57■■■□□ 2.32
LMBR1-209ENST00000434453 CADPS2Q86UW7 1296 aa29.57■■■□□ 2.32
LMBR1-209ENST00000434453 KRT85P78386 507 aa29.56■■■□□ 2.32
LMBR1-209ENST00000434453 MCMDC2Q4G0Z9 681 aa29.56■■■□□ 2.32
LMBR1-209ENST00000434453 KLHL34Q8N239 644 aa29.56■■■□□ 2.32
LMBR1-209ENST00000434453 NEK1Q96PY6 1258 aa29.56■■■□□ 2.32
LMBR1-209ENST00000434453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.56■■■□□ 2.32
LMBR1-209ENST00000434453 ELP1O95163 1332 aa29.56■■■□□ 2.32
LMBR1-209ENST00000434453 KBTBD3Q8NAB2 608 aa29.55■■■□□ 2.32
LMBR1-209ENST00000434453 U3KPZ7 1027 aaPredicted RBP29.55■■■□□ 2.32
LMBR1-209ENST00000434453 KCPQ6ZWJ8 1503 aa29.55■■■□□ 2.32
LMBR1-209ENST00000434453 PTMAP06454 111 aaKnown RBP29.54■■■□□ 2.32
LMBR1-209ENST00000434453 SLFNL1Q499Z3 407 aa29.54■■■□□ 2.32
LMBR1-209ENST00000434453 GTF3C6Q969F1 213 aa29.54■■■□□ 2.32
LMBR1-209ENST00000434453 JAK2O60674 1132 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 ADCY5O95622 1261 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 CCDC9Q9Y3X0 531 aaKnown RBP29.53■■■□□ 2.32
LMBR1-209ENST00000434453 SH3TC1Q8TE82 1336 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 A1BGP04217 495 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 CHMP3Q9Y3E7 222 aa29.53■■■□□ 2.32
LMBR1-209ENST00000434453 TERF1P54274 439 aa29.52■■■□□ 2.32
LMBR1-209ENST00000434453 STOX1Q6ZVD7 989 aa29.52■■■□□ 2.32
LMBR1-209ENST00000434453 CWC25Q9NXE8 425 aaPredicted RBP29.52■■■□□ 2.32
LMBR1-209ENST00000434453 PALLDQ8WX93 1383 aa29.52■■■□□ 2.32
LMBR1-209ENST00000434453 LIG1P18858 919 aa29.52■■■□□ 2.32
LMBR1-209ENST00000434453 Q6ZUG5 572 aa29.52■■■□□ 2.32
LMBR1-209ENST00000434453 KDM4AO75164 1064 aa29.51■■■□□ 2.31
LMBR1-209ENST00000434453 MPNDQ8N594 471 aa29.51■■■□□ 2.31
LMBR1-209ENST00000434453 XIRP1Q702N8 1843 aaKnown RBP29.51■■■□□ 2.31
LMBR1-209ENST00000434453 PCDH11XQ9BZA7 1347 aa29.51■■■□□ 2.31
LMBR1-209ENST00000434453 PCDH11YQ9BZA8 1340 aa29.51■■■□□ 2.31
LMBR1-209ENST00000434453 TIMM10P62072 90 aa29.51■■■□□ 2.31
LMBR1-209ENST00000434453 ZCRB1Q8TBF4 217 aaKnown RBP29.51■■■□□ 2.31
LMBR1-209ENST00000434453 R3HCC1Q9Y3T6 440 aaKnown RBP29.51■■■□□ 2.31
LMBR1-209ENST00000434453 WDR17Q8IZU2 1322 aa29.5■■■□□ 2.31
LMBR1-209ENST00000434453 SHANK3Q9BYB0 1731 aa29.5■■■□□ 2.31
LMBR1-209ENST00000434453 AP5Z1O43299 807 aa29.49■■■□□ 2.31
LMBR1-209ENST00000434453 TFIP11Q9UBB9 837 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms