RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
SF1-209ENST00000433274 ATP5JP18859 108 aa18.39■□□□□ 0.53
SF1-209ENST00000433274 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
SF1-209ENST00000433274 K7ELQ4 463 aaPredicted RBP18.38■□□□□ 0.53
SF1-209ENST00000433274 CTSWP56202 376 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 TIMM10P62072 90 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 GREM2Q9H772 168 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 RUFY2Q8WXA3 655 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 GPR108Q9NPR9 543 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
SF1-209ENST00000433274 PALD1Q9ULE6 856 aa18.38■□□□□ 0.53
SF1-209ENST00000433274 ITGA6P23229 1130 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 EDC3Q96F86 508 aaKnown RBP18.37■□□□□ 0.53
SF1-209ENST00000433274 CEP126Q9P2H0 1117 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 PDE8AO60658 829 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
SF1-209ENST00000433274 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
SF1-209ENST00000433274 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
SF1-209ENST00000433274 ATRNO75882 1429 aa18.36■□□□□ 0.53
SF1-209ENST00000433274 NFKBIBQ15653 356 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 DNAJC2Q99543 621 aaKnown RBP18.35■□□□□ 0.53
SF1-209ENST00000433274 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
SF1-209ENST00000433274 ZNF609O15014 1411 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
SF1-209ENST00000433274 UTP14AQ9BVJ6 771 aaKnown RBP18.35■□□□□ 0.53
SF1-209ENST00000433274 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 SH3TC1Q8TE82 1336 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 RAD50Q92878 1312 aa18.35■□□□□ 0.53
SF1-209ENST00000433274 ANKRD18BA2A2Z9 1011 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 HIP1O00291 1037 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 ST18O60284 1047 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
SF1-209ENST00000433274 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
SF1-209ENST00000433274 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
SF1-209ENST00000433274 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 BTAF1O14981 1849 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 ANAPC15P60006 121 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 PARP10Q53GL7 1025 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
SF1-209ENST00000433274 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.53
SF1-209ENST00000433274 HSPA4P34932 840 aa18.33■□□□□ 0.53
SF1-209ENST00000433274 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.53
SF1-209ENST00000433274 HAUS7Q99871 368 aa18.33■□□□□ 0.53
SF1-209ENST00000433274 QTRT2Q9H974 415 aaKnown RBP18.33■□□□□ 0.53
SF1-209ENST00000433274 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
SF1-209ENST00000433274 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
SF1-209ENST00000433274 NHSQ6T4R5 1651 aa18.33■□□□□ 0.52
SF1-209ENST00000433274 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
SF1-209ENST00000433274 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.52
SF1-209ENST00000433274 NEK4P51957 841 aa18.32■□□□□ 0.52
SF1-209ENST00000433274 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
SF1-209ENST00000433274 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
SF1-209ENST00000433274 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
SF1-209ENST00000433274 PTH1RQ03431 593 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 METTL24Q5JXM2 366 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
SF1-209ENST00000433274 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 MYH3P11055 1940 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 NTSR2O95665 410 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 AK7Q96M32 723 aa18.31■□□□□ 0.52
SF1-209ENST00000433274 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SF1-209ENST00000433274 CLEC4GQ6UXB4 293 aa18.3■□□□□ 0.52
SF1-209ENST00000433274 ADORA1P30542 326 aa18.29■□□□□ 0.52
SF1-209ENST00000433274 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
SF1-209ENST00000433274 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
SF1-209ENST00000433274 GNPATO15228 680 aa18.29■□□□□ 0.52
SF1-209ENST00000433274 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
SF1-209ENST00000433274 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
SF1-209ENST00000433274 XAGE2Q96GT9 111 aa18.29■□□□□ 0.52
SF1-209ENST00000433274 CCDC171Q6TFL3 1326 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 GOLIM4O00461 696 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
SF1-209ENST00000433274 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 DDIT3P35638 169 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 BICDL1Q6ZP65 573 aa18.28■□□□□ 0.52
SF1-209ENST00000433274 BCORQ6W2J9 1755 aa18.27■□□□□ 0.52
SF1-209ENST00000433274 CHGBP05060 677 aa18.27■□□□□ 0.52
SF1-209ENST00000433274 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
SF1-209ENST00000433274 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.52
SF1-209ENST00000433274 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
SF1-209ENST00000433274 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.51
SF1-209ENST00000433274 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.51
SF1-209ENST00000433274 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.51
SF1-209ENST00000433274 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
SF1-209ENST00000433274 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
SF1-209ENST00000433274 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
SF1-209ENST00000433274 SRP68Q9UHB9 627 aaKnown RBP18.26■□□□□ 0.51
SF1-209ENST00000433274 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
SF1-209ENST00000433274 KCNJ4P48050 445 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms