RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 NUP62CLQ9H1M0 184 aa17.52■□□□□ 0.39
DDX56-205ENST00000433257 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
DDX56-205ENST00000433257 DDB1Q16531 1140 aa17.51■□□□□ 0.39
DDX56-205ENST00000433257 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
DDX56-205ENST00000433257 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 KRT32Q14532 448 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 RASEFQ8IZ41 740 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
DDX56-205ENST00000433257 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
DDX56-205ENST00000433257 PDCL2Q8N4E4 241 aa17.49■□□□□ 0.39
DDX56-205ENST00000433257 TTC12Q9H892 705 aaPredicted RBP17.49■□□□□ 0.39
DDX56-205ENST00000433257 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
DDX56-205ENST00000433257 NEMFO60524 1076 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 IL25Q9H293 177 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 CDC25BP30305 580 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
DDX56-205ENST00000433257 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 FEZ1Q99689 392 aa17.48■□□□□ 0.39
DDX56-205ENST00000433257 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
DDX56-205ENST00000433257 KCNJ4P48050 445 aa17.47■□□□□ 0.39
DDX56-205ENST00000433257 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
DDX56-205ENST00000433257 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
DDX56-205ENST00000433257 RBM43Q6ZSC3 357 aaKnown RBP17.47■□□□□ 0.39
DDX56-205ENST00000433257 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
DDX56-205ENST00000433257 CTIFO43310 598 aaKnown RBP17.46■□□□□ 0.39
DDX56-205ENST00000433257 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
DDX56-205ENST00000433257 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
DDX56-205ENST00000433257 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
DDX56-205ENST00000433257 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
DDX56-205ENST00000433257 CTAGE5O15320 804 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 TYRO3Q06418 890 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 DMTNQ08495 405 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 CREB3L3Q68CJ9 461 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 PRDM4Q9UKN5 801 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 MAP4K4O95819 1239 aaPredicted RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 TDRD7Q8NHU6 1098 aaKnown RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
DDX56-205ENST00000433257 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
DDX56-205ENST00000433257 DISP2A7MBM2 1401 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 UTYO14607 1347 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 ME3Q16798 604 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 ATL3Q6DD88 541 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
DDX56-205ENST00000433257 ANKRD7Q92527 254 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 CLSTN2Q9H4D0 955 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
DDX56-205ENST00000433257 KIF20AO95235 890 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 PLCB2Q00722 1185 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 TEFQ10587 303 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 SPATA32Q96LK8 384 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 ZNF830Q96NB3 372 aaPredicted RBP17.43■□□□□ 0.38
DDX56-205ENST00000433257 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 ADCY9O60503 1353 aa17.43■□□□□ 0.38
DDX56-205ENST00000433257 PTH1RQ03431 593 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.385e-8■□□□□ 8.8
DDX56-205ENST00000433257 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
DDX56-205ENST00000433257 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
DDX56-205ENST00000433257 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 MRC1P22897 1456 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 LARGE1O95461 756 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
DDX56-205ENST00000433257 SLC27A2O14975 620 aa17.41■□□□□ 0.38
DDX56-205ENST00000433257 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
DDX56-205ENST00000433257 ZNF710Q8N1W2 664 aa17.41■□□□□ 0.38
DDX56-205ENST00000433257 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
DDX56-205ENST00000433257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■□□□□ 10.5
DDX56-205ENST00000433257 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
DDX56-205ENST00000433257 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 SARM1Q6SZW1 724 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 AACSQ86V21 672 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
DDX56-205ENST00000433257 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms