RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 CTSWP56202 376 aa14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 GRAPQ13588 217 aa14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 CLUAP1Q96AJ1 413 aa14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 CCDC85AQ96PX6 553 aaPredicted RBP14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
SPTLC3-202ENST00000431275 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 CSF1RP07333 972 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 FOXO4P98177 505 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 SOGA3Q5TF21 947 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 OLFM4Q6UX06 510 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 SEC31BQ9NQW1 1179 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 LAMB2P55268 1798 aa14.01□□□□□ -0.17
SPTLC3-202ENST00000431275 ARFGEF1Q9Y6D6 1849 aa14□□□□□ -0.17
SPTLC3-202ENST00000431275 PPEF1O14829 653 aaPredicted RBP14□□□□□ -0.17
SPTLC3-202ENST00000431275 EPHA10Q5JZY3 1008 aa14□□□□□ -0.17
SPTLC3-202ENST00000431275 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
SPTLC3-202ENST00000431275 GREM2Q9H772 168 aa14□□□□□ -0.17
SPTLC3-202ENST00000431275 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 SP8Q8IXZ3 490 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 KAZALD1Q96I82 304 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 ATP6V0A2Q9Y487 856 aa13.99□□□□□ -0.17
SPTLC3-202ENST00000431275 NFKBIEO00221 500 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 LMBR1LQ6UX01 489 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 TMC4Q7Z404 712 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 SLC51AQ86UW1 340 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 TMEM57Q8N5G2 664 aa13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
SPTLC3-202ENST00000431275 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 ITGA6P23229 1130 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 RASSF7Q02833 373 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 ANKRD18AQ8IVF6 992 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 FTSJ3Q8IY81 847 aaKnown RBP13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 CDC5LQ99459 802 aaKnown RBP13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
SPTLC3-202ENST00000431275 PLIN1O60240 522 aa13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 RLBP1P12271 317 aa13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 MEIS3Q99687 375 aa13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 TAOK3Q9H2K8 898 aa13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
SPTLC3-202ENST00000431275 LTBP3Q9NS15 1303 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 ANKRD18BA2A2Z9 1011 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 GNAI3P08754 354 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 MS4A1P11836 297 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 PRELPP51888 382 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 ANKRD44Q8N8A2 993 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 TAF1P21675 1872 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 COL4A1P02462 1669 aa13.95□□□□□ -0.18
SPTLC3-202ENST00000431275 LMNB1P20700 586 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 YY1P25490 414 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 CCDC57Q2TAC2 916 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 MPNDQ8N594 471 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 PSMD1Q99460 953 aa13.94□□□□□ -0.18
SPTLC3-202ENST00000431275 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 MPHOSPH8Q99549 860 aa13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 RNF181Q9P0P0 153 aa13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
SPTLC3-202ENST00000431275 MYH3P11055 1940 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 GPSM2P81274 684 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 FER1L6Q2WGJ9 1857 aa13.92□□□□□ -0.18
SPTLC3-202ENST00000431275 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
SPTLC3-202ENST00000431275 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
SPTLC3-202ENST00000431275 GNAI2P04899 355 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 PDE3AQ14432 1141 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 LDHAL6AQ6ZMR3 332 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 PODXL2Q9NZ53 605 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 POLLQ9UGP5 575 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms