RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 CTSWP56202 376 aa31.73■■■□□ 2.67
CPNE1-212ENST00000430570 ARFGEF1Q9Y6D6 1849 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 TAF1P21675 1872 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 PLIN1O60240 522 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 RLBP1P12271 317 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 EPHA10Q5JZY3 1008 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 DDX46Q7L014 1031 aaKnown RBP31.72■■■□□ 2.67
CPNE1-212ENST00000430570 TTLL11Q8NHH1 800 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 SUCLG2Q96I99 432 aa31.72■■■□□ 2.67
CPNE1-212ENST00000430570 C21orf2O43822 256 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 GRIN3BO60391 1043 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 FOXO4P98177 505 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 SLC51AQ86UW1 340 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 TMEM57Q8N5G2 664 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 C7orf43Q8WVR3 580 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 KAZALD1Q96I82 304 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 SEC31BQ9NQW1 1179 aa31.71■■■□□ 2.67
CPNE1-212ENST00000430570 COL4A1P02462 1669 aa31.7■■■□□ 2.67
CPNE1-212ENST00000430570 CCDC152Q4G0S7 254 aa31.7■■■□□ 2.66
CPNE1-212ENST00000430570 DZIP1LQ8IYY4 767 aaKnown RBP31.7■■■□□ 2.66
CPNE1-212ENST00000430570 GOLGB1Q14789 3259 aaKnown RBP31.69■■■□□ 2.66
CPNE1-212ENST00000430570 CSF1RP07333 972 aa31.69■■■□□ 2.66
CPNE1-212ENST00000430570 OLFM4Q6UX06 510 aa31.69■■■□□ 2.66
CPNE1-212ENST00000430570 CELF1Q92879 486 aaKnown RBP31.69■■■□□ 2.66
CPNE1-212ENST00000430570 MYH3P11055 1940 aa31.68■■■□□ 2.66
CPNE1-212ENST00000430570 GRAPQ13588 217 aa31.68■■■□□ 2.66
CPNE1-212ENST00000430570 GRAPLQ8TC17 118 aaPredicted RBP31.68■■■□□ 2.66
CPNE1-212ENST00000430570 GREM2Q9H772 168 aa31.68■■■□□ 2.66
CPNE1-212ENST00000430570 ARHGAP27Q6ZUM4 889 aa31.67■■■□□ 2.66
CPNE1-212ENST00000430570 FTSJ3Q8IY81 847 aaKnown RBP31.67■■■□□ 2.66
CPNE1-212ENST00000430570 PANK1Q8TE04 598 aa31.66■■■□□ 2.66
CPNE1-212ENST00000430570 MEIS3Q99687 375 aa31.66■■■□□ 2.66
CPNE1-212ENST00000430570 PPEF1O14829 653 aaPredicted RBP31.65■■■□□ 2.66
CPNE1-212ENST00000430570 BBOX1O75936 387 aa31.64■■■□□ 2.66
CPNE1-212ENST00000430570 LMBR1LQ6UX01 489 aa31.64■■■□□ 2.66
CPNE1-212ENST00000430570 FAM161AQ3B820 660 aa31.63■■■□□ 2.65
CPNE1-212ENST00000430570 RPS8P62241 208 aaKnown RBP31.62■■■□□ 2.65
CPNE1-212ENST00000430570 BICC1Q9H694 974 aaKnown RBP31.62■■■□□ 2.65
CPNE1-212ENST00000430570 UTRNP46939 3433 aa31.62■■■□□ 2.65
CPNE1-212ENST00000430570 RTL9Q8NET4 1388 aa31.61■■■□□ 2.65
CPNE1-212ENST00000430570 UBTFL1P0CB47 393 aaPredicted RBP31.61■■■□□ 2.65
CPNE1-212ENST00000430570 ITGA6P23229 1130 aa31.6■■■□□ 2.65
CPNE1-212ENST00000430570 ANKRD44Q8N8A2 993 aa31.6■■■□□ 2.65
CPNE1-212ENST00000430570 CHMP3Q9Y3E7 222 aa31.6■■■□□ 2.65
CPNE1-212ENST00000430570 ATP6V0A2Q9Y487 856 aa31.6■■■□□ 2.65
CPNE1-212ENST00000430570 NFKBIEO00221 500 aa31.59■■■□□ 2.65
CPNE1-212ENST00000430570 CCDC93Q567U6 631 aa31.59■■■□□ 2.65
CPNE1-212ENST00000430570 ITPRIPQ8IWB1 547 aa31.59■■■□□ 2.65
CPNE1-212ENST00000430570 RASSF7Q02833 373 aa31.58■■■□□ 2.65
CPNE1-212ENST00000430570 RABL6Q3YEC7 729 aaPredicted RBP31.58■■■□□ 2.65
CPNE1-212ENST00000430570 C20orf194Q5TEA3 1177 aa31.58■■■□□ 2.65
CPNE1-212ENST00000430570 SP8Q8IXZ3 490 aa31.58■■■□□ 2.65
CPNE1-212ENST00000430570 MS4A1P11836 297 aa31.57■■■□□ 2.64
CPNE1-212ENST00000430570 SOGA3Q5TF21 947 aa31.57■■■□□ 2.64
CPNE1-212ENST00000430570 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.57■■■□□ 2.64
CPNE1-212ENST00000430570 LRRFIP2Q9Y608 721 aaKnown RBP31.57■■■□□ 2.64
CPNE1-212ENST00000430570 SNED1Q8TER0 1413 aa31.56■■■□□ 2.64
CPNE1-212ENST00000430570 ANKRD18AQ8IVF6 992 aa31.56■■■□□ 2.64
CPNE1-212ENST00000430570 CDC5LQ99459 802 aaKnown RBP31.56■■■□□ 2.64
CPNE1-212ENST00000430570 FER1L6Q2WGJ9 1857 aa31.56■■■□□ 2.64
CPNE1-212ENST00000430570 GNAI3P08754 354 aa31.55■■■□□ 2.64
CPNE1-212ENST00000430570 PRELPP51888 382 aa31.55■■■□□ 2.64
CPNE1-212ENST00000430570 ANKRD18BA2A2Z9 1011 aa31.54■■■□□ 2.64
CPNE1-212ENST00000430570 ZBTB7BO15156 539 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-212ENST00000430570 CC2D2BQ6DHV5 1058 aa31.54■■■□□ 2.64
CPNE1-212ENST00000430570 TMC4Q7Z404 712 aa31.54■■■□□ 2.64
CPNE1-212ENST00000430570 COG6Q9Y2V7 657 aa31.54■■■□□ 2.64
CPNE1-212ENST00000430570 IFIT5Q13325 482 aaKnown RBP31.53■■■□□ 2.64
CPNE1-212ENST00000430570 RRP1P56182 461 aaKnown RBP31.52■■■□□ 2.64
CPNE1-212ENST00000430570 PDE3AQ14432 1141 aa31.52■■■□□ 2.64
CPNE1-212ENST00000430570 RTKN2Q8IZC4 609 aa31.52■■■□□ 2.64
CPNE1-212ENST00000430570 ZNF594Q96JF6 807 aaPredicted RBP31.52■■■□□ 2.64
CPNE1-212ENST00000430570 MVPQ14764 893 aaKnown RBP31.51■■■□□ 2.64
CPNE1-212ENST00000430570 CCDC57Q2TAC2 916 aa31.51■■■□□ 2.64
CPNE1-212ENST00000430570 TMX4Q9H1E5 349 aaPredicted RBP31.5■■■□□ 2.63
CPNE1-212ENST00000430570 TAOK3Q9H2K8 898 aa31.5■■■□□ 2.63
CPNE1-212ENST00000430570 SPEF2Q9C093 1822 aa31.5■■■□□ 2.63
CPNE1-212ENST00000430570 IGHMBP2P38935 993 aaKnown RBP31.49■■■□□ 2.63
CPNE1-212ENST00000430570 FKBP4Q02790 459 aaKnown RBP eCLIP31.49■■■□□ 2.63
CPNE1-212ENST00000430570 BSDC1Q9NW68 430 aaPredicted RBP31.49■■■□□ 2.63
CPNE1-212ENST00000430570 HDAC5Q9UQL6 1122 aa31.49■■■□□ 2.63
CPNE1-212ENST00000430570 LRRC37AA6NMS7 1700 aa31.49■■■□□ 2.63
CPNE1-212ENST00000430570 GNAI2P04899 355 aa31.49■■■□□ 2.63
CPNE1-212ENST00000430570 GPSM2P81274 684 aa31.49■■■□□ 2.63
CPNE1-212ENST00000430570 MPNDQ8N594 471 aa31.49■■■□□ 2.63
CPNE1-212ENST00000430570 LTBP3Q9NS15 1303 aa31.48■■■□□ 2.63
CPNE1-212ENST00000430570 SBF1O95248 1867 aa31.48■■■□□ 2.63
CPNE1-212ENST00000430570 CHD4Q14839 1912 aa31.47■■■□□ 2.63
CPNE1-212ENST00000430570 GRIPAP1Q4V328 841 aa31.47■■■□□ 2.63
CPNE1-212ENST00000430570 MPHOSPH8Q99549 860 aa31.47■■■□□ 2.63
CPNE1-212ENST00000430570 C1orf115Q9H7X2 142 aa31.47■■■□□ 2.63
CPNE1-212ENST00000430570 ZNF277Q9NRM2 450 aaPredicted RBP31.47■■■□□ 2.63
CPNE1-212ENST00000430570 MINPP1Q9UNW1 487 aa31.47■■■□□ 2.63
CPNE1-212ENST00000430570 NSFL1CQ9UNZ2 370 aaKnown RBP31.47■■■□□ 2.63
CPNE1-212ENST00000430570 RFX5P48382 616 aaPredicted RBP31.46■■■□□ 2.63
CPNE1-212ENST00000430570 C9orf131Q5VYM1 1079 aa31.46■■■□□ 2.63
CPNE1-212ENST00000430570 DPP8Q6V1X1 898 aaPredicted RBP31.46■■■□□ 2.63
CPNE1-212ENST00000430570 PSMD1Q99460 953 aa31.46■■■□□ 2.63
CPNE1-212ENST00000430570 CCDC88AQ3V6T2 1871 aa31.45■■■□□ 2.63
CPNE1-212ENST00000430570 TAF7LQ5H9L4 462 aa31.45■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms