RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
CALD1-207ENST00000430085 CIAO1O76071 339 aa17.4■□□□□ 0.38
CALD1-207ENST00000430085 BAG6P46379 1132 aa17.4■□□□□ 0.38
CALD1-207ENST00000430085 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
CALD1-207ENST00000430085 KIF2CQ99661 725 aa17.4■□□□□ 0.38
CALD1-207ENST00000430085 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 PLSCR1O15162 318 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 CAMTA2O94983 1202 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 CSF1RP07333 972 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 IFIT5Q13325 482 aaKnown RBP17.39■□□□□ 0.37
CALD1-207ENST00000430085 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 ZNF594Q96JF6 807 aaPredicted RBP17.39■□□□□ 0.37
CALD1-207ENST00000430085 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
CALD1-207ENST00000430085 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
CALD1-207ENST00000430085 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
CALD1-207ENST00000430085 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 SOCS7O14512 581 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 CTSWP56202 376 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
CALD1-207ENST00000430085 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
CALD1-207ENST00000430085 PDE8AO60658 829 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 KCNQ4P56696 695 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 PARP10Q53GL7 1025 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 PROM2Q8N271 834 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 SNX21Q969T3 373 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 GPR108Q9NPR9 543 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 MCCP23508 829 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 UTP14AQ9BVJ6 771 aaKnown RBP17.37■□□□□ 0.37
CALD1-207ENST00000430085 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
CALD1-207ENST00000430085 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 RABEP1Q15276 862 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 TXNRD1Q16881 649 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 RUFY2Q8WXA3 655 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 AK7Q96M32 723 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
CALD1-207ENST00000430085 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
CALD1-207ENST00000430085 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
CALD1-207ENST00000430085 MYH3P11055 1940 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 ATP5JP18859 108 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 CEP126Q9P2H0 1117 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 HIP1O00291 1037 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 ITGA6P23229 1130 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
CALD1-207ENST00000430085 CWC27Q6UX04 472 aaKnown RBP17.35■□□□□ 0.37
CALD1-207ENST00000430085 PUS3Q9BZE2 481 aaKnown RBP17.35■□□□□ 0.37
CALD1-207ENST00000430085 GREM2Q9H772 168 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
CALD1-207ENST00000430085 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
CALD1-207ENST00000430085 SGSM2O43147 1006 aa17.34■□□□□ 0.37
CALD1-207ENST00000430085 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
CALD1-207ENST00000430085 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
CALD1-207ENST00000430085 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
CALD1-207ENST00000430085 ZNF609O15014 1411 aa17.33■□□□□ 0.37
CALD1-207ENST00000430085 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.37
CALD1-207ENST00000430085 FSD1Q9BTV5 496 aa17.33■□□□□ 0.37
CALD1-207ENST00000430085 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.37
CALD1-207ENST00000430085 TIMM10P62072 90 aa17.32■□□□□ 0.36
CALD1-207ENST00000430085 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
CALD1-207ENST00000430085 LDHAL6AQ6ZMR3 332 aa17.32■□□□□ 0.36
CALD1-207ENST00000430085 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
CALD1-207ENST00000430085 A0A1B0GUL7 405 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 GNPATO15228 680 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 IL25Q9H293 177 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 CNNM1Q9NRU3 951 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 RGL2O15211 777 aa17.31■□□□□ 0.36
CALD1-207ENST00000430085 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CALD1-207ENST00000430085 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
CALD1-207ENST00000430085 NTSR2O95665 410 aa17.3■□□□□ 0.36
CALD1-207ENST00000430085 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
CALD1-207ENST00000430085 SPRYD3Q8NCJ5 442 aa17.3■□□□□ 0.36
CALD1-207ENST00000430085 HAUS7Q99871 368 aa17.3■□□□□ 0.36
CALD1-207ENST00000430085 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
CALD1-207ENST00000430085 ST18O60284 1047 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 ANAPC15P60006 121 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 NBR1Q14596 966 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 RAD50Q92878 1312 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 C4BP0C0L5 1744 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
CALD1-207ENST00000430085 ZPR1O75312 459 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
CALD1-207ENST00000430085 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
CALD1-207ENST00000430085 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
CALD1-207ENST00000430085 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
CALD1-207ENST00000430085 NMIQ13287 307 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms