RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 GAS2L3Q86XJ1 694 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 OTUD7AQ8TE49 926 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 L3MBTL3Q96JM7 780 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 LMBRD1Q9NUN5 540 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 HDAC5Q9UQL6 1122 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 TNRC18O15417 2968 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 EXOC5O00471 708 aa10.54□□□□□ -0.72
GABPB1-205ENST00000429662 TOMM70O94826 608 aa10.54□□□□□ -0.72
GABPB1-205ENST00000429662 FKBP5Q13451 457 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-205ENST00000429662 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
GABPB1-205ENST00000429662 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
GABPB1-205ENST00000429662 G2E3Q7L622 706 aa10.54□□□□□ -0.72
GABPB1-205ENST00000429662 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-205ENST00000429662 N4BP2Q86UW6 1770 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-205ENST00000429662 CHMLP26374 656 aa10.53□□□□□ -0.72
GABPB1-205ENST00000429662 SLC27A3Q5K4L6 730 aa10.53□□□□□ -0.72
GABPB1-205ENST00000429662 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-205ENST00000429662 CD2APQ9Y5K6 639 aa10.53□□□□□ -0.72
GABPB1-205ENST00000429662 F6X3S4 739 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.72
GABPB1-205ENST00000429662 HOXC9P31274 260 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 NEK4P51957 841 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 ZSCAN23Q3MJ62 389 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 SSH3Q8TE77 659 aa10.52□□□□□ -0.72
GABPB1-205ENST00000429662 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 APBB1O00213 710 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 BRD1O95696 1058 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 TPM2P07951 284 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 MCM5P33992 734 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 TERF1P54274 439 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 NLRP6P59044 892 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 MSL1Q68DK7 614 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.73
GABPB1-205ENST00000429662 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 MIS18AQ9NYP9 233 aa10.52□□□□□ -0.73
GABPB1-205ENST00000429662 CACNA1FO60840 1977 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 ERBB3P21860 1342 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
GABPB1-205ENST00000429662 C4BP0C0L5 1744 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 PRPF40AO75400 957 aaKnown RBP10.51□□□□□ -0.73
GABPB1-205ENST00000429662 PHF14O94880 888 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 PDIA4P13667 645 aaKnown RBP10.51□□□□□ -0.73
GABPB1-205ENST00000429662 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
GABPB1-205ENST00000429662 CAVIN1Q6NZI2 390 aaKnown RBP10.51□□□□□ -0.73
GABPB1-205ENST00000429662 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 TFCP2L1Q9NZI6 479 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 EXOC6BQ9Y2D4 811 aa10.51□□□□□ -0.73
GABPB1-205ENST00000429662 ARFGEF1Q9Y6D6 1849 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 MSNP26038 577 aaKnown RBP10.5□□□□□ -0.73
GABPB1-205ENST00000429662 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 RILPL2Q969X0 211 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 USP44Q9H0E7 712 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 ZDHHC9Q9Y397 364 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
GABPB1-205ENST00000429662 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
GABPB1-205ENST00000429662 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
GABPB1-205ENST00000429662 SBF1O95248 1867 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 PNMA6EA0A0J9YXQ4 647 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 LETM1O95202 739 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-205ENST00000429662 HSPA4P34932 840 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 CNTROBQ8N137 903 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 ZGPATQ8N5A5 531 aaKnown RBP10.49□□□□□ -0.73
GABPB1-205ENST00000429662 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 PDLIM2Q96JY6 352 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
GABPB1-205ENST00000429662 TTC41PQ6P2S7 1318 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 USP42Q9H9J4 1324 aaKnown RBP10.48□□□□□ -0.73
GABPB1-205ENST00000429662 CEMIPQ8WUJ3 1361 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 SOX12O15370 315 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
GABPB1-205ENST00000429662 KIAA1211Q6ZU35 1233 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 KCNH5Q8NCM2 988 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
GABPB1-205ENST00000429662 IP6K1Q92551 441 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
GABPB1-205ENST00000429662 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 UVSSAQ2YD98 709 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 AMOTQ4VCS5 1084 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 GPT2Q8TD30 523 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.47□□□□□ -0.73
GABPB1-205ENST00000429662 ATP6V1DQ9Y5K8 247 aa10.47□□□□□ -0.73
GABPB1-205ENST00000429662 SGSM2O43147 1006 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 RRP9O43818 475 aaKnown RBP10.46□□□□□ -0.74
GABPB1-205ENST00000429662 SURF6O75683 361 aaKnown RBP10.46□□□□□ -0.74
GABPB1-205ENST00000429662 ALDH1L1O75891 902 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 GLRX3O76003 335 aaKnown RBP10.46□□□□□ -0.74
GABPB1-205ENST00000429662 IL2RBP14784 551 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms