RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 PALLDQ8WX93 1383 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 SASH1O94885 1247 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 ATP2B1P20020 1258 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 CHMLP26374 656 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 ITPK1Q13572 414 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.3
HIPK2-203ENST00000428878 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.3
HIPK2-203ENST00000428878 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
HIPK2-203ENST00000428878 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
HIPK2-203ENST00000428878 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
HIPK2-203ENST00000428878 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
HIPK2-203ENST00000428878 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 EYA2O00167 538 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 RNF20Q5VTR2 975 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
HIPK2-203ENST00000428878 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
HIPK2-203ENST00000428878 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 CYP19A1P11511 503 aaPredicted RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 ZGPATQ8N5A5 531 aaKnown RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 IL15P40933 162 aaPredicted RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 TRDNQ13061 729 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 NLRP10Q86W26 655 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
HIPK2-203ENST00000428878 DDX49Q9Y6V7 483 aaKnown RBP13.18□□□□□ -0.3
HIPK2-203ENST00000428878 H3BQV1 296 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 TDO2P48775 406 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
HIPK2-203ENST00000428878 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
HIPK2-203ENST00000428878 RABEP1Q15276 862 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
HIPK2-203ENST00000428878 ZAP70P43403 619 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 GYG1P46976 350 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
HIPK2-203ENST00000428878 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 SSFA2P28290 1259 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
HIPK2-203ENST00000428878 CPLX1O14810 134 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 BCAMP50895 628 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 AKAP2Q9Y2D5 859 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 RXRAP19793 462 aa13.16□□□□□ -0.3
HIPK2-203ENST00000428878 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 FIBPO43427 364 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 SLC5A1P13866 664 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 PTH1RQ03431 593 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 PEAK1Q9H792 1746 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
HIPK2-203ENST00000428878 PDE8AO60658 829 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 CTSWP56202 376 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 IBTKQ9P2D0 1353 aaPredicted RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 PHKA1P46020 1223 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
HIPK2-203ENST00000428878 COL5A2P05997 1499 aaPredicted RBP13.14□□□□□ -0.31
HIPK2-203ENST00000428878 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms