RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 CIAO1O76071 339 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 ADCK5Q3MIX3 580 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 BLOC1S2Q6QNY1 142 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 TMEM63CQ9P1W3 806 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 TJP1Q07157 1748 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 SPEF2Q9C093 1822 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 PDCP20941 246 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 SYT1P21579 422 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 HS1BP3Q53T59 392 aa24.04■■□□□ 1.44
PMPCB-202ENST00000428154 U3KPZ7 1027 aaPredicted RBP24.04■■□□□ 1.44
PMPCB-202ENST00000428154 TAF5LO75529 589 aa24.03■■□□□ 1.44
PMPCB-202ENST00000428154 LETM1O95202 739 aaPredicted RBP24.03■■□□□ 1.44
PMPCB-202ENST00000428154 F13A1P00488 732 aa24.03■■□□□ 1.44
PMPCB-202ENST00000428154 FOXD4L5Q5VV16 416 aaPredicted RBP24.03■■□□□ 1.44
PMPCB-202ENST00000428154 FOXD4L4Q8WXT5 416 aaPredicted RBP24.03■■□□□ 1.44
PMPCB-202ENST00000428154 PALLDQ8WX93 1383 aa24.02■■□□□ 1.44
PMPCB-202ENST00000428154 TRIM28Q13263 835 aaKnown RBP24.02■■□□□ 1.44
PMPCB-202ENST00000428154 RRAGDQ9NQL2 400 aaPredicted RBP24.02■■□□□ 1.44
PMPCB-202ENST00000428154 RPS6KB1P23443 525 aa24.01■■□□□ 1.43
PMPCB-202ENST00000428154 PIP4K2AP48426 406 aaPredicted RBP24.01■■□□□ 1.43
PMPCB-202ENST00000428154 EVA1CP58658 441 aa24.01■■□□□ 1.43
PMPCB-202ENST00000428154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.01■■□□□ 1.43
PMPCB-202ENST00000428154 MCMDC2Q4G0Z9 681 aa24.01■■□□□ 1.43
PMPCB-202ENST00000428154 KBTBD3Q8NAB2 608 aa24.01■■□□□ 1.43
PMPCB-202ENST00000428154 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 ESPNB1AK53 854 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 GJB2P29033 226 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 PRIM1P49642 420 aaKnown RBP24■■□□□ 1.43
PMPCB-202ENST00000428154 TTLL7Q6ZT98 887 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 USP48Q86UV5 1035 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 CCDC83Q8IWF9 413 aa24■■□□□ 1.43
PMPCB-202ENST00000428154 UBE2HP62256 183 aa23.99■■□□□ 1.43
PMPCB-202ENST00000428154 DBNDD2Q9BQY9 259 aa23.99■■□□□ 1.43
PMPCB-202ENST00000428154 ISCA1Q9BUE6 129 aa23.99■■□□□ 1.43
PMPCB-202ENST00000428154 HELLSQ9NRZ9 838 aa23.99■■□□□ 1.43
PMPCB-202ENST00000428154 EYA2O00167 538 aa23.98■■□□□ 1.43
PMPCB-202ENST00000428154 LRRFIP1Q32MZ4 808 aaKnown RBP23.98■■□□□ 1.43
PMPCB-202ENST00000428154 TMOD3Q9NYL9 352 aa23.98■■□□□ 1.43
PMPCB-202ENST00000428154 RBM27Q9P2N5 1060 aaKnown RBP23.98■■□□□ 1.43
PMPCB-202ENST00000428154 A1BGP04217 495 aa23.98■■□□□ 1.43
PMPCB-202ENST00000428154 ME3Q16798 604 aa23.98■■□□□ 1.43
PMPCB-202ENST00000428154 ATG9AQ7Z3C6 839 aa23.98■■□□□ 1.43
PMPCB-202ENST00000428154 HMGB1P09429 215 aaKnown RBP23.97■■□□□ 1.43
PMPCB-202ENST00000428154 CPA1P15085 419 aa23.97■■□□□ 1.43
PMPCB-202ENST00000428154 RBSNQ9H1K0 784 aa23.97■■□□□ 1.43
PMPCB-202ENST00000428154 TCHHQ07283 1943 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 SYCE3A1L190 88 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 LARGE1O95461 756 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 TCIRG1Q13488 830 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 FAM184AQ8NB25 1140 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 DDX54Q8TDD1 881 aaKnown RBP23.96■■□□□ 1.43
PMPCB-202ENST00000428154 JARID2Q92833 1246 aaPredicted RBP23.96■■□□□ 1.43
PMPCB-202ENST00000428154 PLA2G12BQ9BX93 195 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 MTMR6Q9Y217 621 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 CHMP3Q9Y3E7 222 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 ZNF589Q86UQ0 364 aaPredicted RBP23.96■■□□□ 1.43
PMPCB-202ENST00000428154 PDLIM2Q96JY6 352 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 TPCN1Q9ULQ1 816 aa23.96■■□□□ 1.43
PMPCB-202ENST00000428154 TOGARAM1Q9Y4F4 1720 aa23.95■■□□□ 1.42
PMPCB-202ENST00000428154 CCDC183Q5T5S1 534 aa23.95■■□□□ 1.42
PMPCB-202ENST00000428154 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
PMPCB-202ENST00000428154 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
PMPCB-202ENST00000428154 ZNF609O15014 1411 aa23.95■■□□□ 1.42
PMPCB-202ENST00000428154 KIF6Q6ZMV9 814 aa23.94■■□□□ 1.42
PMPCB-202ENST00000428154 CHMP4CQ96CF2 233 aa23.94■■□□□ 1.42
PMPCB-202ENST00000428154 NEK1Q96PY6 1258 aa23.94■■□□□ 1.42
PMPCB-202ENST00000428154 DNAJC2Q99543 621 aaKnown RBP23.94■■□□□ 1.42
PMPCB-202ENST00000428154 DSCC1Q9BVC3 393 aa23.94■■□□□ 1.42
PMPCB-202ENST00000428154 AKAP2Q9Y2D5 859 aa23.94■■□□□ 1.42
PMPCB-202ENST00000428154 LRP6O75581 1613 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 STARD3NLO95772 234 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 PAG1Q9NWQ8 432 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 ABCC12Q96J65 1359 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 PCCAP05165 728 aaPredicted RBP23.93■■□□□ 1.42
PMPCB-202ENST00000428154 CHAMP1Q96JM3 812 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
PMPCB-202ENST00000428154 UVSSAQ2YD98 709 aa23.92■■□□□ 1.42
PMPCB-202ENST00000428154 HSP90AB3PQ58FF7 597 aa23.92■■□□□ 1.42
PMPCB-202ENST00000428154 LARP1BQ659C4 914 aaKnown RBP23.92■■□□□ 1.42
PMPCB-202ENST00000428154 ZBTB3Q9H5J0 574 aa23.92■■□□□ 1.42
PMPCB-202ENST00000428154 ZNF335Q9H4Z2 1342 aaPredicted RBP23.91■■□□□ 1.42
PMPCB-202ENST00000428154 ST3GAL1Q11201 340 aa23.91■■□□□ 1.42
PMPCB-202ENST00000428154 CCDC57Q2TAC2 916 aa23.91■■□□□ 1.42
PMPCB-202ENST00000428154 NEUROD6Q96NK8 337 aa23.91■■□□□ 1.42
PMPCB-202ENST00000428154 CEP126Q9P2H0 1117 aa23.91■■□□□ 1.42
PMPCB-202ENST00000428154 CNPY2Q9Y2B0 182 aa23.91■■□□□ 1.42
PMPCB-202ENST00000428154 TOB2Q14106 344 aaPredicted RBP23.9■■□□□ 1.42
PMPCB-202ENST00000428154 EDC3Q96F86 508 aaKnown RBP23.9■■□□□ 1.42
PMPCB-202ENST00000428154 COL14A1Q05707 1796 aaKnown RBP23.9■■□□□ 1.42
PMPCB-202ENST00000428154 GADD45BO75293 160 aaPredicted RBP23.9■■□□□ 1.42
PMPCB-202ENST00000428154 ZMYM1Q5SVZ6 1142 aa23.9■■□□□ 1.42
PMPCB-202ENST00000428154 ZSCAN30Q86W11 494 aa23.9■■□□□ 1.42
PMPCB-202ENST00000428154 LARP6Q9BRS8 491 aaKnown RBP23.9■■□□□ 1.42
PMPCB-202ENST00000428154 ELP1O95163 1332 aa23.89■■□□□ 1.42
PMPCB-202ENST00000428154 CDHR2Q9BYE9 1310 aa23.89■■□□□ 1.42
PMPCB-202ENST00000428154 ZFYP08048 801 aaPredicted RBP23.88■■□□□ 1.41
PMPCB-202ENST00000428154 IFIT1P09914 478 aaKnown RBP23.88■■□□□ 1.41
PMPCB-202ENST00000428154 KRT85P78386 507 aa23.88■■□□□ 1.41
PMPCB-202ENST00000428154 DDX46Q7L014 1031 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms