RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-202ENST00000427926 APBB1IPQ7Z5R6 666 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-202ENST00000427926 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
CLTCL1-202ENST00000427926 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
CLTCL1-202ENST00000427926 RPRD2Q5VT52 1461 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-202ENST00000427926 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 EP400NLQ6ZTU2 488 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 SPDYE3A6NKU9 549 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 FERMT3Q86UX7 667 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 SUPT20HQ8NEM7 779 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 CCDC148Q8NFR7 591 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 ESR2Q92731 530 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 ECHDC1Q9NTX5 307 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 TNNT1P13805 278 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 ACTN2P35609 894 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 COPS6Q7L5N1 327 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 IMPG2Q9BZV3 1241 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 KRT23Q9C075 422 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 DHX29Q7Z478 1369 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 GOLGA6L7A0A1B0GV03 622 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 LMAN1P49257 510 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 METAP2P50579 478 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 GPATCH8Q9UKJ3 1502 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-202ENST00000427926 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 GNAQP50148 359 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 WTAPQ15007 396 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 ANXA1P04083 346 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 CCT2P78371 535 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 PRKG1Q13976 671 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 BACH1O14867 736 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 STAMBPO95630 424 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 HEATR3Q7Z4Q2 680 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 MMRN2Q9H8L6 949 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 RAPGEF6Q8TEU7 1601 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 NUP160Q12769 1436 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 ZBTB24O43167 697 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 ERLIN1O75477 346 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 CALM1P0DP23 149 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 CALM2P0DP24 149 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 CALM3P0DP25 149 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 NIM1KQ8IY84 436 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
CLTCL1-202ENST00000427926 UFL1O94874 794 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 SLC26A6Q9BXS9 759 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 SP4Q02446 784 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 TSNARE1Q96NA8 513 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 CCDC66A2RUB6 948 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 MRE11P49959 708 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 CNNM3Q8NE01 707 aa11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-202ENST00000427926 TRAK2O60296 914 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 ZFYP08048 801 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 KRT13P13646 458 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 NAPAP54920 295 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 CHPF2Q9P2E5 772 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 FAM193AP78312 1265 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 MCM9Q9NXL9 1143 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 RIMS2Q9UQ26 1411 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 NSD2O96028 1365 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
CLTCL1-202ENST00000427926 H7C1D1 291 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 SPOUT1Q5T280 376 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 BIRC2Q13490 618 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 BRPF3Q9ULD4 1205 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 UGGT2Q9NYU1 1516 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 ATP10BO94823 1461 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 TMTC2Q8N394 836 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
CLTCL1-202ENST00000427926 CCDC113Q9H0I3 377 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms