RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
LMCD1-204ENST00000426878 SP8Q8IXZ3 490 aa21.95■■□□□ 1.1
LMCD1-204ENST00000426878 ZNF526Q8TF50 670 aaPredicted RBP21.94■■□□□ 1.1
LMCD1-204ENST00000426878 SSH1Q8WYL5 1049 aa21.94■■□□□ 1.1
LMCD1-204ENST00000426878 TMX4Q9H1E5 349 aaPredicted RBP21.94■■□□□ 1.1
LMCD1-204ENST00000426878 F6X3S4 739 aa21.93■■□□□ 1.1
LMCD1-204ENST00000426878 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
LMCD1-204ENST00000426878 TIAM2Q8IVF5 1701 aa21.93■■□□□ 1.1
LMCD1-204ENST00000426878 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
LMCD1-204ENST00000426878 KDM2BQ8NHM5 1336 aa21.92■■□□□ 1.1
LMCD1-204ENST00000426878 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
LMCD1-204ENST00000426878 CCDC152Q4G0S7 254 aa21.91■■□□□ 1.1
LMCD1-204ENST00000426878 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
LMCD1-204ENST00000426878 PTPRCP08575 1304 aa21.91■■□□□ 1.1
LMCD1-204ENST00000426878 TAF1P21675 1872 aa21.91■■□□□ 1.1
LMCD1-204ENST00000426878 GLTPD2A6NH11 291 aa21.9■■□□□ 1.1
LMCD1-204ENST00000426878 CASP7P55210 303 aa21.9■■□□□ 1.1
LMCD1-204ENST00000426878 UBE3BQ7Z3V4 1068 aa21.9■■□□□ 1.1
LMCD1-204ENST00000426878 CELF1Q92879 486 aaKnown RBP21.9■■□□□ 1.1
LMCD1-204ENST00000426878 PLA2G12BQ9BX93 195 aa21.9■■□□□ 1.1
LMCD1-204ENST00000426878 RTFDC1Q9BY42 306 aaPredicted RBP21.9■■□□□ 1.1
LMCD1-204ENST00000426878 IARSP41252 1262 aaKnown RBP21.89■■□□□ 1.1
LMCD1-204ENST00000426878 CTSWP56202 376 aa21.89■■□□□ 1.1
LMCD1-204ENST00000426878 RPS8P62241 208 aaKnown RBP21.89■■□□□ 1.1
LMCD1-204ENST00000426878 SLC51AQ86UW1 340 aa21.89■■□□□ 1.1
LMCD1-204ENST00000426878 VPS33BQ9H267 617 aa21.89■■□□□ 1.1
LMCD1-204ENST00000426878 KIF3CO14782 793 aa21.89■■□□□ 1.09
LMCD1-204ENST00000426878 BRPF1P55201 1214 aaPredicted RBP21.89■■□□□ 1.09
LMCD1-204ENST00000426878 DPY19L2Q6NUT2 758 aa21.89■■□□□ 1.09
LMCD1-204ENST00000426878 LRRC37AA6NMS7 1700 aa21.88■■□□□ 1.09
LMCD1-204ENST00000426878 MYH3P11055 1940 aa21.88■■□□□ 1.09
LMCD1-204ENST00000426878 RTL9Q8NET4 1388 aa21.88■■□□□ 1.09
LMCD1-204ENST00000426878 ALDH1L1O75891 902 aa21.88■■□□□ 1.09
LMCD1-204ENST00000426878 TTLL11Q8NHH1 800 aa21.88■■□□□ 1.09
LMCD1-204ENST00000426878 MPNDQ8N594 471 aa21.87■■□□□ 1.09
LMCD1-204ENST00000426878 SUPT20HQ8NEM7 779 aa21.87■■□□□ 1.09
LMCD1-204ENST00000426878 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
LMCD1-204ENST00000426878 SEC31BQ9NQW1 1179 aa21.87■■□□□ 1.09
LMCD1-204ENST00000426878 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
LMCD1-204ENST00000426878 DPP8Q6V1X1 898 aaPredicted RBP21.86■■□□□ 1.09
LMCD1-204ENST00000426878 SRCIN1Q9C0H9 1055 aa21.86■■□□□ 1.09
LMCD1-204ENST00000426878 COL4A1P02462 1669 aa21.86■■□□□ 1.09
LMCD1-204ENST00000426878 SLC4A10Q6U841 1118 aa21.85■■□□□ 1.09
LMCD1-204ENST00000426878 BCL2L13Q9BXK5 485 aa21.85■■□□□ 1.09
LMCD1-204ENST00000426878 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 FZD9O00144 591 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 GRM8O00222 908 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 CSF1RP07333 972 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 C1QTNF8P60827 252 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 JDP2Q8WYK2 163 aa21.84■■□□□ 1.09
LMCD1-204ENST00000426878 RARSP54136 660 aaKnown RBP21.83■■□□□ 1.09
LMCD1-204ENST00000426878 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
LMCD1-204ENST00000426878 RRAGCQ9HB90 399 aa21.83■■□□□ 1.09
LMCD1-204ENST00000426878 LARGE2Q8N3Y3 721 aa21.82■■□□□ 1.08
LMCD1-204ENST00000426878 CCDC85AQ96PX6 553 aaPredicted RBP21.82■■□□□ 1.08
LMCD1-204ENST00000426878 GREM2Q9H772 168 aa21.82■■□□□ 1.08
LMCD1-204ENST00000426878 WDR90Q96KV7 1748 aa21.82■■□□□ 1.08
LMCD1-204ENST00000426878 ANKRD18AQ8IVF6 992 aa21.81■■□□□ 1.08
LMCD1-204ENST00000426878 PODXL2Q9NZ53 605 aa21.81■■□□□ 1.08
LMCD1-204ENST00000426878 C9orf78Q9NZ63 289 aaPredicted RBP21.81■■□□□ 1.08
LMCD1-204ENST00000426878 UTYO14607 1347 aa21.81■■□□□ 1.08
LMCD1-204ENST00000426878 COL4A5P29400 1685 aa21.81■■□□□ 1.08
LMCD1-204ENST00000426878 PPIP5K2O43314 1243 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 TOMM70O94826 608 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 VEGFAP15692 232 aaPredicted RBP21.8■■□□□ 1.08
LMCD1-204ENST00000426878 FOXO4P98177 505 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 KIAA2012Q0VF49 1180 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 NSFL1CQ9UNZ2 370 aaKnown RBP21.8■■□□□ 1.08
LMCD1-204ENST00000426878 DUOX1Q9NRD9 1551 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 LTBP1Q14766 1721 aa21.8■■□□□ 1.08
LMCD1-204ENST00000426878 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
LMCD1-204ENST00000426878 L3MBTL3Q96JM7 780 aaPredicted RBP21.8■■□□□ 1.08
LMCD1-204ENST00000426878 POTECB2RU33 542 aa21.79■■□□□ 1.08
LMCD1-204ENST00000426878 GPSM2P81274 684 aa21.79■■□□□ 1.08
LMCD1-204ENST00000426878 AOC3Q16853 763 aa21.79■■□□□ 1.08
LMCD1-204ENST00000426878 BSDC1Q9NW68 430 aaPredicted RBP21.79■■□□□ 1.08
LMCD1-204ENST00000426878 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
LMCD1-204ENST00000426878 ZNF541Q9H0D2 1346 aa21.78■■□□□ 1.08
LMCD1-204ENST00000426878 ITGA6P23229 1130 aa21.78■■□□□ 1.08
LMCD1-204ENST00000426878 NIM1KQ8IY84 436 aa21.78■■□□□ 1.08
LMCD1-204ENST00000426878 POLLQ9UGP5 575 aa21.78■■□□□ 1.08
LMCD1-204ENST00000426878 EIF6P56537 245 aaKnown RBP21.77■■□□□ 1.08
LMCD1-204ENST00000426878 FAM161AQ3B820 660 aa21.77■■□□□ 1.08
LMCD1-204ENST00000426878 GPC2Q8N158 579 aa21.77■■□□□ 1.08
LMCD1-204ENST00000426878 TBC1D16Q8TBP0 767 aa21.77■■□□□ 1.08
LMCD1-204ENST00000426878 ARHGAP45Q92619 1136 aa21.77■■□□□ 1.08
LMCD1-204ENST00000426878 API5Q9BZZ5 524 aaKnown RBP21.77■■□□□ 1.08
LMCD1-204ENST00000426878 KIF16BQ96L93 1317 aa21.77■■□□□ 1.07
LMCD1-204ENST00000426878 C16orf71Q8IYS4 520 aaPredicted RBP21.76■■□□□ 1.07
LMCD1-204ENST00000426878 RBM46Q8TBY0 533 aaKnown RBP21.76■■□□□ 1.07
LMCD1-204ENST00000426878 ZNRF3Q9ULT6 936 aa21.76■■□□□ 1.07
LMCD1-204ENST00000426878 NBPF7P0C2Y1 421 aaPredicted RBP21.75■■□□□ 1.07
LMCD1-204ENST00000426878 IGHMBP2P38935 993 aaKnown RBP21.75■■□□□ 1.07
LMCD1-204ENST00000426878 WASHC4Q2M389 1173 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 EPHA10Q5JZY3 1008 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 EYA3Q99504 573 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 ANKIB1Q9P2G1 1089 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 XDHP47989 1333 aa21.75■■□□□ 1.07
LMCD1-204ENST00000426878 C6orf229H3BNL8 230 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms