RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 LTBP3Q9NS15 1303 aa29.75■■■□□ 2.35
PDGFA-205ENST00000426681 PPEF1O14829 653 aaPredicted RBP29.75■■■□□ 2.35
PDGFA-205ENST00000426681 RTKN2Q8IZC4 609 aa29.75■■■□□ 2.35
PDGFA-205ENST00000426681 CTSWP56202 376 aa29.74■■■□□ 2.35
PDGFA-205ENST00000426681 CCDC152Q4G0S7 254 aa29.74■■■□□ 2.35
PDGFA-205ENST00000426681 GRIPAP1Q4V328 841 aa29.74■■■□□ 2.35
PDGFA-205ENST00000426681 API5Q9BZZ5 524 aaKnown RBP29.74■■■□□ 2.35
PDGFA-205ENST00000426681 MYH3P11055 1940 aa29.74■■■□□ 2.35
PDGFA-205ENST00000426681 SNED1Q8TER0 1413 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 GRM8O00222 908 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 RASSF7Q02833 373 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 OLFM4Q6UX06 510 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 ATP6V0A2Q9Y487 856 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 TAF1P21675 1872 aa29.73■■■□□ 2.35
PDGFA-205ENST00000426681 BCAR3O75815 825 aa29.72■■■□□ 2.35
PDGFA-205ENST00000426681 LMNB1P20700 586 aa29.72■■■□□ 2.35
PDGFA-205ENST00000426681 TMC4Q7Z404 712 aa29.72■■■□□ 2.35
PDGFA-205ENST00000426681 TTLL11Q8NHH1 800 aa29.72■■■□□ 2.35
PDGFA-205ENST00000426681 TAOK3Q9H2K8 898 aa29.72■■■□□ 2.35
PDGFA-205ENST00000426681 PRELPP51888 382 aa29.71■■■□□ 2.35
PDGFA-205ENST00000426681 C9orf131Q5VYM1 1079 aa29.71■■■□□ 2.35
PDGFA-205ENST00000426681 SP8Q8IXZ3 490 aa29.71■■■□□ 2.35
PDGFA-205ENST00000426681 C9orf78Q9NZ63 289 aaPredicted RBP29.71■■■□□ 2.35
PDGFA-205ENST00000426681 RTL9Q8NET4 1388 aa29.7■■■□□ 2.35
PDGFA-205ENST00000426681 IPO8O15397 1037 aaKnown RBP29.7■■■□□ 2.35
PDGFA-205ENST00000426681 CELF1Q92879 486 aaKnown RBP29.7■■■□□ 2.35
PDGFA-205ENST00000426681 UTYO14607 1347 aa29.7■■■□□ 2.34
PDGFA-205ENST00000426681 FKBP4Q02790 459 aaKnown RBP eCLIP29.69■■■□□ 2.34
PDGFA-205ENST00000426681 TMX4Q9H1E5 349 aaPredicted RBP29.69■■■□□ 2.34
PDGFA-205ENST00000426681 CCDC88AQ3V6T2 1871 aa29.68■■■□□ 2.34
PDGFA-205ENST00000426681 CSF1RP07333 972 aa29.68■■■□□ 2.34
PDGFA-205ENST00000426681 CCT4P50991 539 aaKnown RBP29.68■■■□□ 2.34
PDGFA-205ENST00000426681 RPS8P62241 208 aaKnown RBP29.68■■■□□ 2.34
PDGFA-205ENST00000426681 PSMD1Q99460 953 aa29.68■■■□□ 2.34
PDGFA-205ENST00000426681 SEC31BQ9NQW1 1179 aa29.68■■■□□ 2.34
PDGFA-205ENST00000426681 RNF181Q9P0P0 153 aa29.68■■■□□ 2.34
PDGFA-205ENST00000426681 COL4A1P02462 1669 aa29.66■■■□□ 2.34
PDGFA-205ENST00000426681 NBPF7P0C2Y1 421 aaPredicted RBP29.65■■■□□ 2.34
PDGFA-205ENST00000426681 FOXO4P98177 505 aa29.65■■■□□ 2.34
PDGFA-205ENST00000426681 SLC51AQ86UW1 340 aa29.65■■■□□ 2.34
PDGFA-205ENST00000426681 CCDC85AQ96PX6 553 aaPredicted RBP29.65■■■□□ 2.34
PDGFA-205ENST00000426681 GREM2Q9H772 168 aa29.65■■■□□ 2.34
PDGFA-205ENST00000426681 LRRC37AA6NMS7 1700 aa29.65■■■□□ 2.34
PDGFA-205ENST00000426681 ATF7IPQ6VMQ6 1270 aa29.64■■■□□ 2.34
PDGFA-205ENST00000426681 USP44Q9H0E7 712 aa29.64■■■□□ 2.34
PDGFA-205ENST00000426681 DICER1Q9UPY3 1922 aaKnown RBP29.64■■■□□ 2.34
PDGFA-205ENST00000426681 ZC3H4Q9UPT8 1303 aaKnown RBP29.64■■■□□ 2.34
PDGFA-205ENST00000426681 ZNF784Q8NCA9 323 aaPredicted RBP29.63■■■□□ 2.33
PDGFA-205ENST00000426681 CDC5LQ99459 802 aaKnown RBP29.63■■■□□ 2.33
PDGFA-205ENST00000426681 TRIM27P14373 513 aa29.62■■■□□ 2.33
PDGFA-205ENST00000426681 FRAT1Q92837 279 aaPredicted RBP29.62■■■□□ 2.33
PDGFA-205ENST00000426681 EPHA10Q5JZY3 1008 aa29.61■■■□□ 2.33
PDGFA-205ENST00000426681 INTS3Q68E01 1043 aaKnown RBP29.61■■■□□ 2.33
PDGFA-205ENST00000426681 ANKRD18AQ8IVF6 992 aa29.61■■■□□ 2.33
PDGFA-205ENST00000426681 RTFDC1Q9BY42 306 aaPredicted RBP29.61■■■□□ 2.33
PDGFA-205ENST00000426681 ZKSCAN2Q63HK3 967 aa29.6■■■□□ 2.33
PDGFA-205ENST00000426681 MPNDQ8N594 471 aa29.6■■■□□ 2.33
PDGFA-205ENST00000426681 KAZALD1Q96I82 304 aa29.6■■■□□ 2.33
PDGFA-205ENST00000426681 ZNF277Q9NRM2 450 aaPredicted RBP29.6■■■□□ 2.33
PDGFA-205ENST00000426681 FAM161AQ3B820 660 aa29.59■■■□□ 2.33
PDGFA-205ENST00000426681 ITGA6P23229 1130 aa29.58■■■□□ 2.33
PDGFA-205ENST00000426681 LMBR1LQ6UX01 489 aa29.58■■■□□ 2.33
PDGFA-205ENST00000426681 DPP8Q6V1X1 898 aaPredicted RBP29.58■■■□□ 2.33
PDGFA-205ENST00000426681 SUCLG2Q96I99 432 aa29.58■■■□□ 2.33
PDGFA-205ENST00000426681 VPS33BQ9H267 617 aa29.58■■■□□ 2.33
PDGFA-205ENST00000426681 IARSP41252 1262 aaKnown RBP29.57■■■□□ 2.32
PDGFA-205ENST00000426681 SUPT20HQ8NEM7 779 aa29.57■■■□□ 2.32
PDGFA-205ENST00000426681 BSDC1Q9NW68 430 aaPredicted RBP29.57■■■□□ 2.32
PDGFA-205ENST00000426681 TIAM2Q8IVF5 1701 aa29.57■■■□□ 2.32
PDGFA-205ENST00000426681 ANKRD18BA2A2Z9 1011 aa29.55■■■□□ 2.32
PDGFA-205ENST00000426681 IFIT5Q13325 482 aaKnown RBP29.55■■■□□ 2.32
PDGFA-205ENST00000426681 RABL6Q3YEC7 729 aaPredicted RBP29.55■■■□□ 2.32
PDGFA-205ENST00000426681 TNNQ9UQP3 1299 aa29.55■■■□□ 2.32
PDGFA-205ENST00000426681 GPSM2P81274 684 aa29.54■■■□□ 2.32
PDGFA-205ENST00000426681 PODXL2Q9NZ53 605 aa29.54■■■□□ 2.32
PDGFA-205ENST00000426681 RCAN3Q9UKA8 241 aa29.54■■■□□ 2.32
PDGFA-205ENST00000426681 NSFL1CQ9UNZ2 370 aaKnown RBP29.54■■■□□ 2.32
PDGFA-205ENST00000426681 LTBP1Q14766 1721 aa29.54■■■□□ 2.32
PDGFA-205ENST00000426681 DUOX1Q9NRD9 1551 aa29.53■■■□□ 2.32
PDGFA-205ENST00000426681 IGHMBP2P38935 993 aaKnown RBP29.53■■■□□ 2.32
PDGFA-205ENST00000426681 YTHDC1Q96MU7 727 aaKnown RBP29.53■■■□□ 2.32
PDGFA-205ENST00000426681 BICC1Q9H694 974 aaKnown RBP29.53■■■□□ 2.32
PDGFA-205ENST00000426681 ANKRD44Q8N8A2 993 aa29.52■■■□□ 2.32
PDGFA-205ENST00000426681 CLUAP1Q96AJ1 413 aa29.52■■■□□ 2.32
PDGFA-205ENST00000426681 CHMP3Q9Y3E7 222 aa29.52■■■□□ 2.32
PDGFA-205ENST00000426681 SPEF2Q9C093 1822 aa29.51■■■□□ 2.31
PDGFA-205ENST00000426681 UBTFL1P0CB47 393 aaPredicted RBP29.51■■■□□ 2.31
PDGFA-205ENST00000426681 CCDC57Q2TAC2 916 aa29.51■■■□□ 2.31
PDGFA-205ENST00000426681 HDAC5Q9UQL6 1122 aa29.51■■■□□ 2.31
PDGFA-205ENST00000426681 MPHOSPH8Q99549 860 aa29.5■■■□□ 2.31
PDGFA-205ENST00000426681 MINPP1Q9UNW1 487 aa29.5■■■□□ 2.31
PDGFA-205ENST00000426681 LARGE2Q8N3Y3 721 aa29.49■■■□□ 2.31
PDGFA-205ENST00000426681 JDP2Q8WYK2 163 aa29.49■■■□□ 2.31
PDGFA-205ENST00000426681 GPBP1L1Q9HC44 474 aaPredicted RBP29.49■■■□□ 2.31
PDGFA-205ENST00000426681 ANKIB1Q9P2G1 1089 aa29.49■■■□□ 2.31
PDGFA-205ENST00000426681 POLLQ9UGP5 575 aa29.49■■■□□ 2.31
PDGFA-205ENST00000426681 KDM2BQ8NHM5 1336 aa29.48■■■□□ 2.31
PDGFA-205ENST00000426681 COL4A5P29400 1685 aa29.48■■■□□ 2.31
PDGFA-205ENST00000426681 GLTPD2A6NH11 291 aa29.48■■■□□ 2.31
PDGFA-205ENST00000426681 PPIP5K2O43314 1243 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms