RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
TMEM248-204ENST00000424964 TNNQ9UQP3 1299 aa18.7■□□□□ 0.58
TMEM248-204ENST00000424964 ABCC4O15439 1325 aa18.7■□□□□ 0.58
TMEM248-204ENST00000424964 MYH3P11055 1940 aa18.69■□□□□ 0.58
TMEM248-204ENST00000424964 PPEF1O14829 653 aaPredicted RBP18.69■□□□□ 0.58
TMEM248-204ENST00000424964 GRAPQ13588 217 aa18.69■□□□□ 0.58
TMEM248-204ENST00000424964 GRAPLQ8TC17 118 aaPredicted RBP18.69■□□□□ 0.58
TMEM248-204ENST00000424964 PLA2G12BQ9BX93 195 aa18.69■□□□□ 0.58
TMEM248-204ENST00000424964 TAF1P21675 1872 aa18.69■□□□□ 0.58
TMEM248-204ENST00000424964 BBOX1O75936 387 aa18.68■□□□□ 0.58
TMEM248-204ENST00000424964 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
TMEM248-204ENST00000424964 SOGA3Q5TF21 947 aa18.68■□□□□ 0.58
TMEM248-204ENST00000424964 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
TMEM248-204ENST00000424964 C7orf43Q8WVR3 580 aa18.68■□□□□ 0.58
TMEM248-204ENST00000424964 TMX4Q9H1E5 349 aaPredicted RBP18.68■□□□□ 0.58
TMEM248-204ENST00000424964 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
TMEM248-204ENST00000424964 INTS3Q68E01 1043 aaKnown RBP18.67■□□□□ 0.58
TMEM248-204ENST00000424964 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
TMEM248-204ENST00000424964 USP44Q9H0E7 712 aa18.67■□□□□ 0.58
TMEM248-204ENST00000424964 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
TMEM248-204ENST00000424964 CHD4Q14839 1912 aa18.66■□□□□ 0.58
TMEM248-204ENST00000424964 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
TMEM248-204ENST00000424964 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
TMEM248-204ENST00000424964 GREM2Q9H772 168 aa18.66■□□□□ 0.58
TMEM248-204ENST00000424964 CHMP3Q9Y3E7 222 aa18.66■□□□□ 0.58
TMEM248-204ENST00000424964 UTYO14607 1347 aa18.66■□□□□ 0.58
TMEM248-204ENST00000424964 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
TMEM248-204ENST00000424964 FOXO4P98177 505 aa18.65■□□□□ 0.58
TMEM248-204ENST00000424964 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
TMEM248-204ENST00000424964 SUCLG2Q96I99 432 aa18.65■□□□□ 0.58
TMEM248-204ENST00000424964 CSF1RP07333 972 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 UBTFL1P0CB47 393 aaPredicted RBP18.64■□□□□ 0.57
TMEM248-204ENST00000424964 RASSF7Q02833 373 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 RTKN2Q8IZC4 609 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 CDC5LQ99459 802 aaKnown RBP18.64■□□□□ 0.57
TMEM248-204ENST00000424964 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
TMEM248-204ENST00000424964 NFKBIEO00221 500 aa18.63■□□□□ 0.57
TMEM248-204ENST00000424964 FAM161AQ3B820 660 aa18.63■□□□□ 0.57
TMEM248-204ENST00000424964 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
TMEM248-204ENST00000424964 UTRNP46939 3433 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 PLIN1O60240 522 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 MS4A1P11836 297 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 ITGA6P23229 1130 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
TMEM248-204ENST00000424964 KAZALD1Q96I82 304 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 MEIS3Q99687 375 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 TAOK3Q9H2K8 898 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 BICC1Q9H694 974 aaKnown RBP18.62■□□□□ 0.57
TMEM248-204ENST00000424964 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 FER1L6Q2WGJ9 1857 aa18.62■□□□□ 0.57
TMEM248-204ENST00000424964 ANKRD18BA2A2Z9 1011 aa18.61■□□□□ 0.57
TMEM248-204ENST00000424964 RLBP1P12271 317 aa18.61■□□□□ 0.57
TMEM248-204ENST00000424964 IFIT5Q13325 482 aaKnown RBP18.61■□□□□ 0.57
TMEM248-204ENST00000424964 GRIPAP1Q4V328 841 aa18.61■□□□□ 0.57
TMEM248-204ENST00000424964 HDAC5Q9UQL6 1122 aa18.61■□□□□ 0.57
TMEM248-204ENST00000424964 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 GNAI3P08754 354 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
TMEM248-204ENST00000424964 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
TMEM248-204ENST00000424964 CCDC57Q2TAC2 916 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 C9orf131Q5VYM1 1079 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 ITPRIPQ8IWB1 547 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 RNF181Q9P0P0 153 aa18.6■□□□□ 0.57
TMEM248-204ENST00000424964 SBF1O95248 1867 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 LMNB1P20700 586 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 YY1P25490 414 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 MPNDQ8N594 471 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 MPHOSPH8Q99549 860 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 COL4A1P02462 1669 aa18.59■□□□□ 0.57
TMEM248-204ENST00000424964 LTBP3Q9NS15 1303 aa18.58■□□□□ 0.57
TMEM248-204ENST00000424964 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
TMEM248-204ENST00000424964 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.56
TMEM248-204ENST00000424964 NSFL1CQ9UNZ2 370 aaKnown RBP18.58■□□□□ 0.56
TMEM248-204ENST00000424964 LRRFIP2Q9Y608 721 aaKnown RBP18.58■□□□□ 0.56
TMEM248-204ENST00000424964 PRELPP51888 382 aa18.57■□□□□ 0.56
TMEM248-204ENST00000424964 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
TMEM248-204ENST00000424964 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
TMEM248-204ENST00000424964 PSMD1Q99460 953 aa18.57■□□□□ 0.56
TMEM248-204ENST00000424964 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
TMEM248-204ENST00000424964 SPEF2Q9C093 1822 aa18.57■□□□□ 0.56
TMEM248-204ENST00000424964 GPSM2P81274 684 aa18.56■□□□□ 0.56
TMEM248-204ENST00000424964 ZNF594Q96JF6 807 aaPredicted RBP18.56■□□□□ 0.56
TMEM248-204ENST00000424964 ANKIB1Q9P2G1 1089 aa18.56■□□□□ 0.56
TMEM248-204ENST00000424964 GNAI2P04899 355 aa18.55■□□□□ 0.56
TMEM248-204ENST00000424964 SUPT20HQ8NEM7 779 aa18.55■□□□□ 0.56
TMEM248-204ENST00000424964 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
TMEM248-204ENST00000424964 C6orf229H3BNL8 230 aa18.54■□□□□ 0.56
TMEM248-204ENST00000424964 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
TMEM248-204ENST00000424964 LDHAL6AQ6ZMR3 332 aa18.54■□□□□ 0.56
TMEM248-204ENST00000424964 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
TMEM248-204ENST00000424964 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms