RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 CCDC178Q5BJE1 867 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 KANK3Q6NY19 840 aa15.93■□□□□ 0.14
SREBF2-202ENST00000424354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.93■□□□□ 0.149e-9■■□□□ 14.5
SREBF2-202ENST00000424354 KIF20AO95235 890 aa15.93■□□□□ 0.14
SREBF2-202ENST00000424354 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
SREBF2-202ENST00000424354 TRERF1Q96PN7 1200 aa15.93■□□□□ 0.14
SREBF2-202ENST00000424354 IL16Q14005 1332 aa15.93■□□□□ 0.14
SREBF2-202ENST00000424354 ZSCAN22P10073 491 aaPredicted RBP15.93■□□□□ 0.14
SREBF2-202ENST00000424354 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
SREBF2-202ENST00000424354 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
SREBF2-202ENST00000424354 HMG20BQ9P0W2 317 aa15.93■□□□□ 0.14
SREBF2-202ENST00000424354 GTPBP4Q9BZE4 634 aaKnown RBP15.92■□□□□ 0.14
SREBF2-202ENST00000424354 ZNF287Q9HBT7 754 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
SREBF2-202ENST00000424354 NUCB1Q02818 461 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 SSRP1Q08945 709 aaKnown RBP15.92■□□□□ 0.14
SREBF2-202ENST00000424354 RAB34Q9BZG1 259 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 GNG11P61952 73 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 CPLX3Q8WVH0 158 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 TAOK3Q9H2K8 898 aa15.92■□□□□ 0.14
SREBF2-202ENST00000424354 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 MCM10Q7L590 875 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 MYO3AQ8NEV4 1616 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 CCDC12Q8WUD4 166 aaPredicted RBP15.91■□□□□ 0.14
SREBF2-202ENST00000424354 SRRTQ9BXP5 876 aaKnown RBP15.91■□□□□ 0.14
SREBF2-202ENST00000424354 SLC12A7Q9Y666 1083 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 GOLGA8BA8MQT2 603 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 SPECC1LQ69YQ0 1117 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 ECHDC1Q9NTX5 307 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 TFIP11Q9UBB9 837 aaKnown RBP15.91■□□□□ 0.14
SREBF2-202ENST00000424354 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
SREBF2-202ENST00000424354 TMX3Q96JJ7 454 aa15.91■□□□□ 0.14
SREBF2-202ENST00000424354 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 ZNF76P36508 570 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 NAPBQ9H115 298 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 SEC63Q9UGP8 760 aaKnown RBP15.9■□□□□ 0.14
SREBF2-202ENST00000424354 ZNF213O14771 459 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 CKAP4Q07065 602 aaKnown RBP15.9■□□□□ 0.14
SREBF2-202ENST00000424354 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 ARFGAP3Q9NP61 516 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
SREBF2-202ENST00000424354 METTL24Q5JXM2 366 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 CTCFLQ8NI51 663 aaPredicted RBP15.9■□□□□ 0.14
SREBF2-202ENST00000424354 TESK2Q96S53 571 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 ANAPC15P60006 121 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 PAF1Q8N7H5 531 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 RNF41Q9H4P4 317 aaPredicted RBP15.9■□□□□ 0.14
SREBF2-202ENST00000424354 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
SREBF2-202ENST00000424354 SSR1P43307 286 aaKnown RBP15.89■□□□□ 0.13
SREBF2-202ENST00000424354 TDRD12Q587J7 1177 aaKnown RBP15.89■□□□□ 0.13
SREBF2-202ENST00000424354 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
SREBF2-202ENST00000424354 ADAMTSL3P82987 1691 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 LTKP29376 864 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 CCDC102BQ68D86 513 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 GIMAP6Q6P9H5 292 aa15.89■□□□□ 0.13
SREBF2-202ENST00000424354 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
SREBF2-202ENST00000424354 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
SREBF2-202ENST00000424354 GSTTP1A0A1W2PQM5 241 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 BIN1O00499 593 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 TMEM266Q2M3C6 531 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 TICAM2Q86XR7 235 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 ARHGAP45Q92619 1136 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 TMEM94Q12767 1356 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 SKILP12757 684 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.139e-12■■■■■ 43.9
SREBF2-202ENST00000424354 TMX1Q9H3N1 280 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 E9PCH4 1651 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 MTIF2P46199 727 aaKnown RBP15.88■□□□□ 0.13
SREBF2-202ENST00000424354 GPATCH11Q8N954 259 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 PIBF1Q8WXW3 757 aa15.88■□□□□ 0.13
SREBF2-202ENST00000424354 SLIT1O75093 1534 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 HSF2BPO75031 334 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
SREBF2-202ENST00000424354 TUBB4BP68371 445 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 CEP112Q8N8E3 955 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 SPATA31E1Q6ZUB1 1445 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 IQCA1Q86XH1 822 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
SREBF2-202ENST00000424354 SLU7O95391 586 aaKnown RBP15.87■□□□□ 0.13
SREBF2-202ENST00000424354 AMPD3Q01432 767 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 NEK1Q96PY6 1258 aa15.87■□□□□ 0.13
SREBF2-202ENST00000424354 CCDC8Q9H0W5 538 aaPredicted RBP15.87■□□□□ 0.13
SREBF2-202ENST00000424354 MNAT1P51948 309 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
SREBF2-202ENST00000424354 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 PANK2Q9BZ23 570 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 PTCH1Q13635 1447 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 C8orf34Q49A92 452 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 CCDC186Q7Z3E2 898 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 MAATS1Q7Z4T9 603 aa15.86■□□□□ 0.13
SREBF2-202ENST00000424354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■□□□□ 8.4
SREBF2-202ENST00000424354 F6X3S4 739 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms