RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
C9orf3-204ENST00000424143 COPRSQ9NQ92 184 aa17.98■□□□□ 0.47
C9orf3-204ENST00000424143 ZSCAN20P17040 1043 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-204ENST00000424143 ANO6Q4KMQ2 910 aa17.98■□□□□ 0.47
C9orf3-204ENST00000424143 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-204ENST00000424143 C17orf53Q8N3J3 647 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-204ENST00000424143 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
C9orf3-204ENST00000424143 MRFAP1L1Q96HT8 127 aa17.98■□□□□ 0.47
C9orf3-204ENST00000424143 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
C9orf3-204ENST00000424143 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
C9orf3-204ENST00000424143 C1orf141Q5JVX7 400 aa17.97■□□□□ 0.47
C9orf3-204ENST00000424143 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
C9orf3-204ENST00000424143 PA2G4Q9UQ80 394 aaKnown RBP17.97■□□□□ 0.47
C9orf3-204ENST00000424143 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 ABCC6O95255 1503 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 PTGS1P23219 599 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 RBM6P78332 1123 aaKnown RBP17.96■□□□□ 0.47
C9orf3-204ENST00000424143 DHX8Q14562 1220 aaKnown RBP17.96■□□□□ 0.47
C9orf3-204ENST00000424143 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
C9orf3-204ENST00000424143 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
C9orf3-204ENST00000424143 MYH15Q9Y2K3 1946 aa17.96■□□□□ 0.46
C9orf3-204ENST00000424143 ZNF165P49910 485 aa17.95■□□□□ 0.46
C9orf3-204ENST00000424143 CCDC186Q7Z3E2 898 aa17.95■□□□□ 0.46
C9orf3-204ENST00000424143 PGBD1Q96JS3 809 aa17.95■□□□□ 0.46
C9orf3-204ENST00000424143 RGPD2P0DJD1 1756 aa17.95■□□□□ 0.46
C9orf3-204ENST00000424143 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 LUZP1Q86V48 1076 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 SPC24Q8NBT2 197 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 PFKFB2O60825 505 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 KIF20AO95235 890 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 KCNA6P17658 529 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 IQCB1Q15051 598 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 PDIA6Q15084 440 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 MPNDQ8N594 471 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 TRIM5Q9C035 493 aa17.94■□□□□ 0.46
C9orf3-204ENST00000424143 MST1RQ04912 1400 aa17.93■□□□□ 0.46
C9orf3-204ENST00000424143 ARHGEF25Q86VW2 580 aa17.93■□□□□ 0.46
C9orf3-204ENST00000424143 FBXL16Q8N461 479 aa17.93■□□□□ 0.46
C9orf3-204ENST00000424143 NEXNQ0ZGT2 675 aa17.92■□□□□ 0.46
C9orf3-204ENST00000424143 PROSER3Q2NL68 480 aa17.92■□□□□ 0.46
C9orf3-204ENST00000424143 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
C9orf3-204ENST00000424143 RABL6Q3YEC7 729 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-204ENST00000424143 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
C9orf3-204ENST00000424143 FERMT3Q86UX7 667 aa17.92■□□□□ 0.46
C9orf3-204ENST00000424143 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-204ENST00000424143 OGFRQ9NZT2 677 aa17.92■□□□□ 0.46
C9orf3-204ENST00000424143 CGNQ9P2M7 1197 aaKnown RBP17.92■□□□□ 0.46
C9orf3-204ENST00000424143 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-204ENST00000424143 NR1I2O75469 434 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 ANXA1P04083 346 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 IGKV5-2P06315 115 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 ADD1P35611 737 aaKnown RBP17.91■□□□□ 0.46
C9orf3-204ENST00000424143 STX1AQ16623 288 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-204ENST00000424143 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 PXDNQ92626 1479 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
C9orf3-204ENST00000424143 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 GCKRQ14397 625 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 CAMK4Q16566 473 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 BICD2Q8TD16 824 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 BRF1Q92994 677 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 ZNF396Q96N95 335 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-204ENST00000424143 HAUS7Q99871 368 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 TUBB4AP04350 444 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 TNNT1P13805 278 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 RFX5P48382 616 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-204ENST00000424143 MCMDC2Q4G0Z9 681 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-204ENST00000424143 DRC7Q8IY82 874 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 TFIP11Q9UBB9 837 aaKnown RBP17.9■□□□□ 0.46
C9orf3-204ENST00000424143 CLIP2Q9UDT6 1046 aa17.9■□□□□ 0.46
C9orf3-204ENST00000424143 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 NCBP1Q09161 790 aaKnown RBP17.89■□□□□ 0.45
C9orf3-204ENST00000424143 ATP2B3Q16720 1220 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 TSC1Q92574 1164 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 GPR108Q9NPR9 543 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 ANO10Q9NW15 660 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
C9orf3-204ENST00000424143 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 SCN11AQ9UI33 1791 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 H3BQV1 296 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 KCNJ6P48051 423 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 FAM193AP78312 1265 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 TNNI3KQ59H18 835 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 LRRC8AQ8IWT6 810 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 CACTINQ8WUQ7 758 aaKnown RBP17.88■□□□□ 0.45
C9orf3-204ENST00000424143 DSCC1Q9BVC3 393 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 HELLSQ9NRZ9 838 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 TLR7Q9NYK1 1049 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms