RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MYH3P11055 1940 aa20.99■□□□□ 0.95
COL18A1-205ENST00000423214 USP50Q70EL3 339 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-205ENST00000423214 ZNF428Q96B54 188 aa20.98■□□□□ 0.95
COL18A1-205ENST00000423214 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
COL18A1-205ENST00000423214 RTFDC1Q9BY42 306 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-205ENST00000423214 VEGFBP49765 207 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 ANKRD13DQ6ZTN6 518 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 TMC4Q7Z404 712 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
COL18A1-205ENST00000423214 HYPKQ9NX55 129 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 ZNRF3Q9ULT6 936 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 SPEF2Q9C093 1822 aa20.97■□□□□ 0.95
COL18A1-205ENST00000423214 DUSP27Q5VZP5 1158 aa20.96■□□□□ 0.95
COL18A1-205ENST00000423214 ADARB2Q9NS39 739 aaKnown RBP20.96■□□□□ 0.95
COL18A1-205ENST00000423214 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
COL18A1-205ENST00000423214 RASSF10A6NK89 507 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 FOXN1O15353 648 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 CALD1Q05682 793 aaKnown RBP20.95■□□□□ 0.94
COL18A1-205ENST00000423214 KIAA2012Q0VF49 1180 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 DEFB115Q30KQ5 88 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 GPRC5DQ9NZD1 345 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 CDHR2Q9BYE9 1310 aa20.95■□□□□ 0.94
COL18A1-205ENST00000423214 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
COL18A1-205ENST00000423214 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
COL18A1-205ENST00000423214 CIAPIN1Q6FI81 312 aa20.94■□□□□ 0.94
COL18A1-205ENST00000423214 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
COL18A1-205ENST00000423214 COL4A1P02462 1669 aa20.93■□□□□ 0.94
COL18A1-205ENST00000423214 PSME4Q14997 1843 aa20.93■□□□□ 0.94
COL18A1-205ENST00000423214 GMPSP49915 693 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-205ENST00000423214 CXCL9Q07325 125 aa20.93■□□□□ 0.94
COL18A1-205ENST00000423214 PAXIP1Q6ZW49 1069 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-205ENST00000423214 ISCA1Q9BUE6 129 aa20.93■□□□□ 0.94
COL18A1-205ENST00000423214 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
COL18A1-205ENST00000423214 POLR2AP24928 1970 aaKnown RBP20.92■□□□□ 0.94
COL18A1-205ENST00000423214 TNIP1Q15025 636 aa20.92■□□□□ 0.94
COL18A1-205ENST00000423214 RTL5Q5HYW3 569 aaPredicted RBP20.92■□□□□ 0.94
COL18A1-205ENST00000423214 IFT57Q9NWB7 429 aa20.92■□□□□ 0.94
COL18A1-205ENST00000423214 APAF1O14727 1248 aa20.91■□□□□ 0.94
COL18A1-205ENST00000423214 RAD17O75943 681 aa20.91■□□□□ 0.94
COL18A1-205ENST00000423214 CTCFP49711 727 aaPredicted RBP20.91■□□□□ 0.94
COL18A1-205ENST00000423214 GNAI1P63096 354 aa20.91■□□□□ 0.94
COL18A1-205ENST00000423214 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
COL18A1-205ENST00000423214 WDR33Q9C0J8 1336 aaKnown RBP20.9■□□□□ 0.94
COL18A1-205ENST00000423214 SCN9AQ15858 1988 aa20.9■□□□□ 0.94
COL18A1-205ENST00000423214 CACNA1FO60840 1977 aa20.89■□□□□ 0.93
COL18A1-205ENST00000423214 TRAF5O00463 557 aa20.89■□□□□ 0.93
COL18A1-205ENST00000423214 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
COL18A1-205ENST00000423214 ZNF853P0CG23 659 aa20.89■□□□□ 0.93
COL18A1-205ENST00000423214 FMR1Q06787 632 aaKnown RBP eCLIP20.89■□□□□ 0.937e-7■□□□□ 10.5
COL18A1-205ENST00000423214 SF3B3Q15393 1217 aaKnown RBP20.89■□□□□ 0.93
COL18A1-205ENST00000423214 CELF1Q92879 486 aaKnown RBP20.89■□□□□ 0.93
COL18A1-205ENST00000423214 PRDM10Q9NQV6 1147 aa20.89■□□□□ 0.93
COL18A1-205ENST00000423214 HSP90B1P14625 803 aaKnown RBP20.88■□□□□ 0.93
COL18A1-205ENST00000423214 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
COL18A1-205ENST00000423214 ECE1P42892 770 aa20.88■□□□□ 0.93
COL18A1-205ENST00000423214 MAP2K1Q02750 393 aaPredicted RBP20.88■□□□□ 0.93
COL18A1-205ENST00000423214 GRM1Q13255 1194 aa20.88■□□□□ 0.93
COL18A1-205ENST00000423214 WASHC4Q2M389 1173 aa20.88■□□□□ 0.93
COL18A1-205ENST00000423214 WBP1LQ9NX94 342 aa20.88■□□□□ 0.93
COL18A1-205ENST00000423214 NSFL1CQ9UNZ2 370 aaKnown RBP20.88■□□□□ 0.93
COL18A1-205ENST00000423214 C6orf229H3BNL8 230 aa20.87■□□□□ 0.93
COL18A1-205ENST00000423214 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-205ENST00000423214 TRIM28Q13263 835 aaKnown RBP20.87■□□□□ 0.93
COL18A1-205ENST00000423214 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
COL18A1-205ENST00000423214 YDJCA8MPS7 323 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
COL18A1-205ENST00000423214 CAPNS2Q96L46 248 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 EYA3Q99504 573 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 MYD88Q99836 296 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 CHMP4AQ9BY43 222 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 DBNDD1Q9H9R9 158 aa20.86■□□□□ 0.93
COL18A1-205ENST00000423214 H7C1D1 291 aa20.85■□□□□ 0.93
COL18A1-205ENST00000423214 TLL2Q9Y6L7 1015 aa20.85■□□□□ 0.93
COL18A1-205ENST00000423214 RIMBP2O15034 1052 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 CELF2O95319 508 aaKnown RBP20.84■□□□□ 0.93
COL18A1-205ENST00000423214 DDX58O95786 925 aaKnown RBP20.84■□□□□ 0.93
COL18A1-205ENST00000423214 LBX1P52954 281 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 GPSM2P81274 684 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 CST9Q5W186 159 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 CYP4F22Q6NT55 531 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 TRPM4Q8TD43 1214 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 BEGAINQ9BUH8 593 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 GLIS2Q9BZE0 524 aaPredicted RBP20.84■□□□□ 0.93
COL18A1-205ENST00000423214 ZNF408Q9H9D4 720 aa20.84■□□□□ 0.93
COL18A1-205ENST00000423214 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
COL18A1-205ENST00000423214 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
COL18A1-205ENST00000423214 CCDC191Q8NCU4 936 aa20.83■□□□□ 0.93
COL18A1-205ENST00000423214 ZC3H15Q8WU90 426 aaKnown RBP20.83■□□□□ 0.93
COL18A1-205ENST00000423214 PSMD14O00487 310 aa20.82■□□□□ 0.92
COL18A1-205ENST00000423214 ECE2O60344 883 aa20.82■□□□□ 0.92
COL18A1-205ENST00000423214 RPS8P62241 208 aaKnown RBP20.82■□□□□ 0.92
COL18A1-205ENST00000423214 CCDC152Q4G0S7 254 aa20.82■□□□□ 0.92
COL18A1-205ENST00000423214 CWC25Q9NXE8 425 aaPredicted RBP20.82■□□□□ 0.92
COL18A1-205ENST00000423214 ZBTB12Q9Y330 459 aaPredicted RBP20.82■□□□□ 0.92
COL18A1-205ENST00000423214 G3V3G9 751 aa20.81■□□□□ 0.92
COL18A1-205ENST00000423214 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
COL18A1-205ENST00000423214 HSPA8P11142 646 aaKnown RBP20.81■□□□□ 0.92
COL18A1-205ENST00000423214 DCAF8Q5TAQ9 597 aa20.81■□□□□ 0.92
COL18A1-205ENST00000423214 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms