RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
FAM3A-209ENST00000421517 PLA2G12BQ9BX93 195 aa18.86■□□□□ 0.61
FAM3A-209ENST00000421517 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
FAM3A-209ENST00000421517 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
FAM3A-209ENST00000421517 RTL9Q8NET4 1388 aa18.85■□□□□ 0.61
FAM3A-209ENST00000421517 PTPRCP08575 1304 aa18.85■□□□□ 0.61
FAM3A-209ENST00000421517 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
FAM3A-209ENST00000421517 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
FAM3A-209ENST00000421517 BRPF1P55201 1214 aaPredicted RBP18.85■□□□□ 0.61
FAM3A-209ENST00000421517 GCKRQ14397 625 aa18.85■□□□□ 0.61
FAM3A-209ENST00000421517 CCDC152Q4G0S7 254 aa18.85■□□□□ 0.61
FAM3A-209ENST00000421517 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.61
FAM3A-209ENST00000421517 FZD9O00144 591 aa18.83■□□□□ 0.6
FAM3A-209ENST00000421517 TOMM70O94826 608 aa18.83■□□□□ 0.6
FAM3A-209ENST00000421517 BEND3Q5T5X7 828 aa18.83■□□□□ 0.6
FAM3A-209ENST00000421517 ALDH1L1O75891 902 aa18.82■□□□□ 0.6
FAM3A-209ENST00000421517 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
FAM3A-209ENST00000421517 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
FAM3A-209ENST00000421517 MRPL50Q8N5N7 158 aaKnown RBP18.82■□□□□ 0.6
FAM3A-209ENST00000421517 LRRC37AA6NMS7 1700 aa18.82■□□□□ 0.6
FAM3A-209ENST00000421517 WDR90Q96KV7 1748 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
FAM3A-209ENST00000421517 CASP7P55210 303 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 MPNDQ8N594 471 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 ZNF526Q8TF50 670 aaPredicted RBP18.81■□□□□ 0.6
FAM3A-209ENST00000421517 JDP2Q8WYK2 163 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 CDCA7LQ96GN5 454 aa18.81■□□□□ 0.6
FAM3A-209ENST00000421517 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
FAM3A-209ENST00000421517 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
FAM3A-209ENST00000421517 CTSWP56202 376 aa18.8■□□□□ 0.6
FAM3A-209ENST00000421517 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
FAM3A-209ENST00000421517 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
FAM3A-209ENST00000421517 ZNF277Q9NRM2 450 aaPredicted RBP18.8■□□□□ 0.6
FAM3A-209ENST00000421517 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
FAM3A-209ENST00000421517 CSF1RP07333 972 aa18.79■□□□□ 0.6
FAM3A-209ENST00000421517 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
FAM3A-209ENST00000421517 DPP8Q6V1X1 898 aaPredicted RBP18.79■□□□□ 0.6
FAM3A-209ENST00000421517 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
FAM3A-209ENST00000421517 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
FAM3A-209ENST00000421517 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
FAM3A-209ENST00000421517 UBE3BQ7Z3V4 1068 aa18.78■□□□□ 0.6
FAM3A-209ENST00000421517 SSH1Q8WYL5 1049 aa18.78■□□□□ 0.6
FAM3A-209ENST00000421517 KIAA2012Q0VF49 1180 aa18.77■□□□□ 0.6
FAM3A-209ENST00000421517 GPC2Q8N158 579 aa18.77■□□□□ 0.6
FAM3A-209ENST00000421517 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
FAM3A-209ENST00000421517 UTYO14607 1347 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 F6X3S4 739 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 FSTL1Q12841 308 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 RRAGCQ9HB90 399 aa18.76■□□□□ 0.59
FAM3A-209ENST00000421517 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
FAM3A-209ENST00000421517 POTECB2RU33 542 aa18.75■□□□□ 0.59
FAM3A-209ENST00000421517 GRM8O00222 908 aa18.75■□□□□ 0.59
FAM3A-209ENST00000421517 EIF6P56537 245 aaKnown RBP18.75■□□□□ 0.59
FAM3A-209ENST00000421517 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
FAM3A-209ENST00000421517 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
FAM3A-209ENST00000421517 PPIP5K2O43314 1243 aa18.74■□□□□ 0.59
FAM3A-209ENST00000421517 NIM1KQ8IY84 436 aa18.74■□□□□ 0.59
FAM3A-209ENST00000421517 ARHGAP45Q92619 1136 aa18.74■□□□□ 0.59
FAM3A-209ENST00000421517 EYA3Q99504 573 aa18.74■□□□□ 0.59
FAM3A-209ENST00000421517 SEC31BQ9NQW1 1179 aa18.74■□□□□ 0.59
FAM3A-209ENST00000421517 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
FAM3A-209ENST00000421517 MYH3P11055 1940 aa18.73■□□□□ 0.59
FAM3A-209ENST00000421517 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
FAM3A-209ENST00000421517 ZNRF3Q9ULT6 936 aa18.73■□□□□ 0.59
FAM3A-209ENST00000421517 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
FAM3A-209ENST00000421517 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
FAM3A-209ENST00000421517 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
FAM3A-209ENST00000421517 SCN4AP35499 1836 aa18.72■□□□□ 0.59
FAM3A-209ENST00000421517 GREM2Q9H772 168 aa18.72■□□□□ 0.59
FAM3A-209ENST00000421517 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
FAM3A-209ENST00000421517 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
FAM3A-209ENST00000421517 COL4A5P29400 1685 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
FAM3A-209ENST00000421517 FOXO4P98177 505 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
FAM3A-209ENST00000421517 AOC3Q16853 763 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 WASHC4Q2M389 1173 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 TBC1D16Q8TBP0 767 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-209ENST00000421517 XDHP47989 1333 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
FAM3A-209ENST00000421517 ITGA6P23229 1130 aa18.7■□□□□ 0.58
FAM3A-209ENST00000421517 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
FAM3A-209ENST00000421517 GPSM2P81274 684 aa18.7■□□□□ 0.58
FAM3A-209ENST00000421517 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
FAM3A-209ENST00000421517 API5Q9BZZ5 524 aaKnown RBP18.7■□□□□ 0.58
FAM3A-209ENST00000421517 POLLQ9UGP5 575 aa18.7■□□□□ 0.58
FAM3A-209ENST00000421517 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
FAM3A-209ENST00000421517 HSPA6P17066 643 aa18.69■□□□□ 0.58
FAM3A-209ENST00000421517 ATP2B4P23634 1241 aa18.69■□□□□ 0.58
FAM3A-209ENST00000421517 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-209ENST00000421517 GGA1Q9UJY5 639 aa18.69■□□□□ 0.58
FAM3A-209ENST00000421517 COL4A1P02462 1669 aa18.69■□□□□ 0.58
FAM3A-209ENST00000421517 TAF1P21675 1872 aa18.69■□□□□ 0.58
FAM3A-209ENST00000421517 ANKRD18BA2A2Z9 1011 aa18.68■□□□□ 0.58
FAM3A-209ENST00000421517 CCT4P50991 539 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms