RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 SNX14Q9Y5W7 946 aa19.1■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
CRTC3-202ENST00000420329 LUC7LQ9NQ29 371 aaKnown RBP19.1■□□□□ 0.65
CRTC3-202ENST00000420329 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
CRTC3-202ENST00000420329 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
CRTC3-202ENST00000420329 SGSM2O43147 1006 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 SYKP43405 635 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 IKQ13123 557 aaPredicted RBP19.09■□□□□ 0.65
CRTC3-202ENST00000420329 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 GADD45BO75293 160 aaPredicted RBP19.09■□□□□ 0.65
CRTC3-202ENST00000420329 TMEM67Q5HYA8 995 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 LDHAL6AQ6ZMR3 332 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 GBP3Q9H0R5 595 aa19.09■□□□□ 0.65
CRTC3-202ENST00000420329 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
CRTC3-202ENST00000420329 PKP1Q13835 747 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.65
CRTC3-202ENST00000420329 TRMT112Q9UI30 125 aaKnown RBP19.08■□□□□ 0.65
CRTC3-202ENST00000420329 GPTP24298 496 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 KRT28Q7Z3Y7 464 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC148Q8NFR7 591 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 TSPYL1Q9H0U9 437 aa19.08■□□□□ 0.65
CRTC3-202ENST00000420329 ANKRD18BA2A2Z9 1011 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 KDM5DQ9BY66 1539 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 FSD2A1L4K1 749 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 BRD1O95696 1058 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 JAKMIP3Q5VZ66 844 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 PLXNC1O60486 1568 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 RAD50Q92878 1312 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 IQCEQ6IPM2 695 aa19.08■□□□□ 0.64
CRTC3-202ENST00000420329 ZHX3Q9H4I2 956 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 PRDM15P57071 1507 aaPredicted RBP19.07■□□□□ 0.64
CRTC3-202ENST00000420329 UBASH3AP57075 661 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 GNG11P61952 73 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 AOX1Q06278 1338 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 KIF24Q5T7B8 1368 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 BMS1Q14692 1282 aaKnown RBP19.07■□□□□ 0.64
CRTC3-202ENST00000420329 FAM173BQ6P4H8 233 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 SLC26A6Q9BXS9 759 aa19.07■□□□□ 0.64
CRTC3-202ENST00000420329 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.07■□□□□ 0.64
CRTC3-202ENST00000420329 V9GYY5 206 aaPredicted RBP19.07■□□□□ 0.64
CRTC3-202ENST00000420329 DTNBO60941 627 aa19.06■□□□□ 0.64
CRTC3-202ENST00000420329 RANBP6O60518 1105 aaKnown RBP19.06■□□□□ 0.64
CRTC3-202ENST00000420329 CCDC94Q9BW85 323 aaPredicted RBP19.06■□□□□ 0.64
CRTC3-202ENST00000420329 HOXC9P31274 260 aa19.06■□□□□ 0.64
CRTC3-202ENST00000420329 SSBP05455 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
CRTC3-202ENST00000420329 ATP2B2Q01814 1243 aa19.06■□□□□ 0.64
CRTC3-202ENST00000420329 KRT222Q8N1A0 295 aa19.06■□□□□ 0.64
CRTC3-202ENST00000420329 CTCFLQ8NI51 663 aaPredicted RBP19.06■□□□□ 0.64
CRTC3-202ENST00000420329 RNF41Q9H4P4 317 aaPredicted RBP19.06■□□□□ 0.64
CRTC3-202ENST00000420329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 GOLGA6L9A6NEM1 432 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 APOBRQ0VD83 1088 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 TXLNBQ8N3L3 684 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 SAMD9LQ8IVG5 1584 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 PTPDC1A2A3K4 754 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 SLC5A1P13866 664 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 CHST3Q7LGC8 479 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 USP19O94966 1318 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 TTF1Q15361 905 aaPredicted RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 CRACR2AQ9BSW2 395 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 BICC1Q9H694 974 aaKnown RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 DNAI1Q9UI46 699 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 MARCKSP29966 332 aaPredicted RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 IQCA1Q86XH1 822 aa19.05■□□□□ 0.64
CRTC3-202ENST00000420329 NUP88Q99567 741 aaPredicted RBP19.05■□□□□ 0.64
CRTC3-202ENST00000420329 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-202ENST00000420329 HSP90AA4PQ58FG1 418 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 C17orf53Q8N3J3 647 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-202ENST00000420329 PPP1R9BQ96SB3 815 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 PAG1Q9NWQ8 432 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 LMOD1P29536 600 aaPredicted RBP19.04■□□□□ 0.64
CRTC3-202ENST00000420329 HSPA4P34932 840 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 GOLGA6L10A6NI86 522 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 HSP90AB3PQ58FF7 597 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
CRTC3-202ENST00000420329 CALCOCO1Q9P1Z2 691 aa19.03■□□□□ 0.64
CRTC3-202ENST00000420329 CFAP65Q6ZU64 1925 aaKnown RBP19.03■□□□□ 0.64
CRTC3-202ENST00000420329 SPTLC2O15270 562 aa19.03■□□□□ 0.64
CRTC3-202ENST00000420329 GTF2F1P35269 517 aaKnown RBP eCLIP19.03■□□□□ 0.64
CRTC3-202ENST00000420329 IL15P40933 162 aaPredicted RBP19.03■□□□□ 0.64
CRTC3-202ENST00000420329 DHX32Q7L7V1 743 aaKnown RBP19.03■□□□□ 0.64
CRTC3-202ENST00000420329 ZSWIM4Q9H7M6 989 aa19.03■□□□□ 0.64
CRTC3-202ENST00000420329 KIAA0232Q92628 1395 aa19.03■□□□□ 0.64
CRTC3-202ENST00000420329 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
CRTC3-202ENST00000420329 TFCP2Q12800 502 aa19.02■□□□□ 0.64
CRTC3-202ENST00000420329 CHRNA2Q15822 529 aa19.02■□□□□ 0.64
CRTC3-202ENST00000420329 CCDC12Q8WUD4 166 aaPredicted RBP19.02■□□□□ 0.64
CRTC3-202ENST00000420329 ZBTB43O43298 467 aa19.02■□□□□ 0.64
CRTC3-202ENST00000420329 SLU7O95391 586 aaKnown RBP19.02■□□□□ 0.64
CRTC3-202ENST00000420329 RPS6KB1P23443 525 aa19.02■□□□□ 0.64
CRTC3-202ENST00000420329 ZNF397Q8NF99 534 aaPredicted RBP19.02■□□□□ 0.64
CRTC3-202ENST00000420329 PALD1Q9ULE6 856 aa19.02■□□□□ 0.64
CRTC3-202ENST00000420329 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
CRTC3-202ENST00000420329 SLC27A2O14975 620 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms