RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 EPHA10Q5JZY3 1008 aa25.57■■□□□ 1.68
EGFR-204ENST00000420316 ITPRIPQ8IWB1 547 aa25.57■■□□□ 1.68
EGFR-204ENST00000420316 RPGRQ92834 1020 aaKnown RBP25.57■■□□□ 1.68
EGFR-204ENST00000420316 SUCLG2Q96I99 432 aa25.57■■□□□ 1.68
EGFR-204ENST00000420316 MEIS3Q99687 375 aa25.57■■□□□ 1.68
EGFR-204ENST00000420316 PDE8AO60658 829 aa25.56■■□□□ 1.68
EGFR-204ENST00000420316 RRP1P56182 461 aaKnown RBP25.56■■□□□ 1.68
EGFR-204ENST00000420316 BRCA1P38398 1863 aaKnown RBP25.56■■□□□ 1.68
EGFR-204ENST00000420316 UTRNP46939 3433 aa25.56■■□□□ 1.68
EGFR-204ENST00000420316 MYH3P11055 1940 aa25.56■■□□□ 1.68
EGFR-204ENST00000420316 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
EGFR-204ENST00000420316 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.56■■□□□ 1.68
EGFR-204ENST00000420316 RBM17Q96I25 401 aaKnown RBP25.56■■□□□ 1.68
EGFR-204ENST00000420316 CRAMP1Q96RY5 1269 aa25.56■■□□□ 1.68
EGFR-204ENST00000420316 ZNF219Q9P2Y4 722 aaPredicted RBP25.56■■□□□ 1.68
EGFR-204ENST00000420316 COL4A1P02462 1669 aa25.55■■□□□ 1.68
EGFR-204ENST00000420316 COG6Q9Y2V7 657 aa25.55■■□□□ 1.68
EGFR-204ENST00000420316 SUPT16HQ9Y5B9 1047 aaKnown RBP25.55■■□□□ 1.68
EGFR-204ENST00000420316 KAZALD1Q96I82 304 aa25.54■■□□□ 1.68
EGFR-204ENST00000420316 UTYO14607 1347 aa25.53■■□□□ 1.68
EGFR-204ENST00000420316 CTSWP56202 376 aa25.53■■□□□ 1.68
EGFR-204ENST00000420316 PLA2G12BQ9BX93 195 aa25.53■■□□□ 1.68
EGFR-204ENST00000420316 FOXO4P98177 505 aa25.52■■□□□ 1.68
EGFR-204ENST00000420316 PRPF40BQ6NWY9 871 aaKnown RBP25.52■■□□□ 1.68
EGFR-204ENST00000420316 SEC31BQ9NQW1 1179 aa25.52■■□□□ 1.68
EGFR-204ENST00000420316 SLX4Q8IY92 1834 aa25.52■■□□□ 1.68
EGFR-204ENST00000420316 DDX46Q7L014 1031 aaKnown RBP25.52■■□□□ 1.68
EGFR-204ENST00000420316 TTLL11Q8NHH1 800 aa25.52■■□□□ 1.68
EGFR-204ENST00000420316 UBTFL1P0CB47 393 aaPredicted RBP25.51■■□□□ 1.67
EGFR-204ENST00000420316 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.67
EGFR-204ENST00000420316 CCDC152Q4G0S7 254 aa25.5■■□□□ 1.67
EGFR-204ENST00000420316 LMBR1LQ6UX01 489 aa25.5■■□□□ 1.67
EGFR-204ENST00000420316 BICC1Q9H694 974 aaKnown RBP25.5■■□□□ 1.67
EGFR-204ENST00000420316 GREM2Q9H772 168 aa25.5■■□□□ 1.67
EGFR-204ENST00000420316 C7orf43Q8WVR3 580 aa25.49■■□□□ 1.67
EGFR-204ENST00000420316 LRRFIP2Q9Y608 721 aaKnown RBP25.49■■□□□ 1.67
EGFR-204ENST00000420316 MS4A1P11836 297 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 FAM161AQ3B820 660 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 OLFM4Q6UX06 510 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 C1orf115Q9H7X2 142 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 SPEF2Q9C093 1822 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 BBOX1O75936 387 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 MVPQ14764 893 aaKnown RBP25.48■■□□□ 1.67
EGFR-204ENST00000420316 ANKRD44Q8N8A2 993 aa25.48■■□□□ 1.67
EGFR-204ENST00000420316 CELF1Q92879 486 aaKnown RBP25.48■■□□□ 1.67
EGFR-204ENST00000420316 C21orf2O43822 256 aa25.47■■□□□ 1.67
EGFR-204ENST00000420316 CSF1RP07333 972 aa25.47■■□□□ 1.67
EGFR-204ENST00000420316 GRAPQ13588 217 aa25.47■■□□□ 1.67
EGFR-204ENST00000420316 PDE3AQ14432 1141 aa25.47■■□□□ 1.67
EGFR-204ENST00000420316 SOGA3Q5TF21 947 aa25.47■■□□□ 1.67
EGFR-204ENST00000420316 GRAPLQ8TC17 118 aaPredicted RBP25.47■■□□□ 1.67
EGFR-204ENST00000420316 ZBTB7BO15156 539 aaPredicted RBP25.46■■□□□ 1.67
EGFR-204ENST00000420316 ARHGAP27Q6ZUM4 889 aa25.45■■□□□ 1.66
EGFR-204ENST00000420316 ARFGEF1Q9Y6D6 1849 aa25.45■■□□□ 1.66
EGFR-204ENST00000420316 GNAI3P08754 354 aa25.44■■□□□ 1.66
EGFR-204ENST00000420316 RTL9Q8NET4 1388 aa25.44■■□□□ 1.66
EGFR-204ENST00000420316 PPEF1O14829 653 aaPredicted RBP25.44■■□□□ 1.66
EGFR-204ENST00000420316 ITGA6P23229 1130 aa25.44■■□□□ 1.66
EGFR-204ENST00000420316 CC2D2BQ6DHV5 1058 aa25.44■■□□□ 1.66
EGFR-204ENST00000420316 TMC4Q7Z404 712 aa25.44■■□□□ 1.66
EGFR-204ENST00000420316 RPS8P62241 208 aaKnown RBP25.43■■□□□ 1.66
EGFR-204ENST00000420316 IRX6P78412 446 aaPredicted RBP25.43■■□□□ 1.66
EGFR-204ENST00000420316 ZNF594Q96JF6 807 aaPredicted RBP25.43■■□□□ 1.66
EGFR-204ENST00000420316 CRBNQ96SW2 442 aa25.42■■□□□ 1.66
EGFR-204ENST00000420316 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
EGFR-204ENST00000420316 GRIPAP1Q4V328 841 aa25.41■■□□□ 1.66
EGFR-204ENST00000420316 CCDC93Q567U6 631 aa25.41■■□□□ 1.66
EGFR-204ENST00000420316 ATP6V0A2Q9Y487 856 aa25.41■■□□□ 1.66
EGFR-204ENST00000420316 GNAI2P04899 355 aa25.4■■□□□ 1.66
EGFR-204ENST00000420316 RABL6Q3YEC7 729 aaPredicted RBP25.4■■□□□ 1.66
EGFR-204ENST00000420316 SP8Q8IXZ3 490 aa25.4■■□□□ 1.66
EGFR-204ENST00000420316 RTKN2Q8IZC4 609 aa25.4■■□□□ 1.66
EGFR-204ENST00000420316 CDC5LQ99459 802 aaKnown RBP25.4■■□□□ 1.66
EGFR-204ENST00000420316 TMX4Q9H1E5 349 aaPredicted RBP25.4■■□□□ 1.66
EGFR-204ENST00000420316 DDX19BQ9UMR2 479 aa25.4■■□□□ 1.66
EGFR-204ENST00000420316 KLHDC4Q8TBB5 520 aa25.39■■□□□ 1.66
EGFR-204ENST00000420316 ANKRD18BA2A2Z9 1011 aa25.39■■□□□ 1.65
EGFR-204ENST00000420316 IFIT5Q13325 482 aaKnown RBP25.39■■□□□ 1.65
EGFR-204ENST00000420316 ANKRD18AQ8IVF6 992 aa25.39■■□□□ 1.65
EGFR-204ENST00000420316 CCDC57Q2TAC2 916 aa25.38■■□□□ 1.65
EGFR-204ENST00000420316 NFKBIEO00221 500 aa25.37■■□□□ 1.65
EGFR-204ENST00000420316 LTBP3Q9NS15 1303 aa25.36■■□□□ 1.65
EGFR-204ENST00000420316 TAF7LQ5H9L4 462 aa25.35■■□□□ 1.65
EGFR-204ENST00000420316 ZBTB40Q9NUA8 1239 aa25.35■■□□□ 1.65
EGFR-204ENST00000420316 PNMA6EA0A0J9YXQ4 647 aa25.35■■□□□ 1.65
EGFR-204ENST00000420316 RASSF7Q02833 373 aa25.35■■□□□ 1.65
EGFR-204ENST00000420316 PUS3Q9BZE2 481 aaKnown RBP25.35■■□□□ 1.65
EGFR-204ENST00000420316 TAOK3Q9H2K8 898 aa25.35■■□□□ 1.65
EGFR-204ENST00000420316 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
EGFR-204ENST00000420316 SNED1Q8TER0 1413 aa25.34■■□□□ 1.65
EGFR-204ENST00000420316 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
EGFR-204ENST00000420316 FKBP4Q02790 459 aaKnown RBP eCLIP25.34■■□□□ 1.65
EGFR-204ENST00000420316 PSMD1Q99460 953 aa25.34■■□□□ 1.65
EGFR-204ENST00000420316 PA2G4Q9UQ80 394 aaKnown RBP25.34■■□□□ 1.65
EGFR-204ENST00000420316 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
EGFR-204ENST00000420316 RFX5P48382 616 aaPredicted RBP25.33■■□□□ 1.65
EGFR-204ENST00000420316 SRGAP3O43295 1099 aa25.32■■□□□ 1.64
EGFR-204ENST00000420316 EXOC6Q8TAG9 804 aa25.32■■□□□ 1.64
EGFR-204ENST00000420316 MPHOSPH8Q99549 860 aa25.32■■□□□ 1.64
EGFR-204ENST00000420316 FER1L6Q2WGJ9 1857 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms