RNA–Protein interactions for RNA: ENST00000418189.5

HDAC11-209, Transcript of histone deacetylase 11, human

TSL 5

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC11-209	ENST00000418189	APAF1	O14727	1248 aa		31.98	■■■□□ 2.71
HDAC11-209	ENST00000418189	MPND	Q8N594	471 aa		31.98	■■■□□ 2.71
HDAC11-209	ENST00000418189	IFT57	Q9NWB7	429 aa		31.98	■■■□□ 2.71
HDAC11-209	ENST00000418189	CALD1	Q05682	793 aa	Known RBP	31.97	■■■□□ 2.71
HDAC11-209	ENST00000418189	TMC4	Q7Z404	712 aa		31.97	■■■□□ 2.71
HDAC11-209	ENST00000418189	EPS15	P42566	896 aa		31.96	■■■□□ 2.71
HDAC11-209	ENST00000418189	ZNRF3	Q9ULT6	936 aa		31.96	■■■□□ 2.71
HDAC11-209	ENST00000418189	GNAI1	P63096	354 aa		31.95	■■■□□ 2.71
HDAC11-209	ENST00000418189	ATP5J2-PTCD1	G3V325	749 aa		31.94	■■■□□ 2.7
HDAC11-209	ENST00000418189	KIAA2012	Q0VF49	1180 aa		31.94	■■■□□ 2.7
HDAC11-209	ENST00000418189	USP50	Q70EL3	339 aa	Predicted RBP	31.94	■■■□□ 2.7
HDAC11-209	ENST00000418189	ZNF428	Q96B54	188 aa		31.94	■■■□□ 2.7
HDAC11-209	ENST00000418189	DUOX1	Q9NRD9	1551 aa		31.94	■■■□□ 2.7
HDAC11-209	ENST00000418189	TRIM28	Q13263	835 aa	Known RBP	31.93	■■■□□ 2.7
HDAC11-209	ENST00000418189	FAM89A	Q96GI7	184 aa		31.93	■■■□□ 2.7
HDAC11-209	ENST00000418189	CXCL9	Q07325	125 aa		31.92	■■■□□ 2.7
HDAC11-209	ENST00000418189	SF3B3	Q15393	1217 aa	Known RBP	31.92	■■■□□ 2.7
HDAC11-209	ENST00000418189	GPRC5D	Q9NZD1	345 aa		31.91	■■■□□ 2.7
HDAC11-209	ENST00000418189	TNS4	Q8IZW8	715 aa		31.9	■■■□□ 2.7
HDAC11-209	ENST00000418189	TRPM7	Q96QT4	1865 aa		31.89	■■■□□ 2.7
HDAC11-209	ENST00000418189	VEGFB	P49765	207 aa		31.89	■■■□□ 2.7
HDAC11-209	ENST00000418189	GOLGA2	Q08379	1002 aa		31.89	■■■□□ 2.7
HDAC11-209	ENST00000418189	ADARB2	Q9NS39	739 aa	Known RBP	31.89	■■■□□ 2.7
HDAC11-209	ENST00000418189	RASSF10	A6NK89	507 aa		31.88	■■■□□ 2.69
HDAC11-209	ENST00000418189	CIAPIN1	Q6FI81	312 aa		31.88	■■■□□ 2.69
HDAC11-209	ENST00000418189	RIC3	Q7Z5B4	369 aa		31.88	■■■□□ 2.69
HDAC11-209	ENST00000418189	CDHR2	Q9BYE9	1310 aa		31.88	■■■□□ 2.69
HDAC11-209	ENST00000418189	CELF1	Q92879	486 aa	Known RBP	31.87	■■■□□ 2.69
HDAC11-209	ENST00000418189	ELL2	O00472	640 aa	Predicted RBP	31.86	■■■□□ 2.69
HDAC11-209	ENST00000418189	IRS4	O14654	1257 aa	Predicted RBP	31.86	■■■□□ 2.69
HDAC11-209	ENST00000418189	GMPS	P49915	693 aa	Predicted RBP	31.86	■■■□□ 2.69
HDAC11-209	ENST00000418189	PHAX	Q9H814	394 aa	Known RBP	31.86	■■■□□ 2.69
HDAC11-209	ENST00000418189	COL4A1	P02462	1669 aa		31.86	■■■□□ 2.69
HDAC11-209	ENST00000418189	DEFB115	Q30KQ5	88 aa		31.85	■■■□□ 2.69
HDAC11-209	ENST00000418189	RTL5	Q5HYW3	569 aa	Predicted RBP	31.85	■■■□□ 2.69
HDAC11-209	ENST00000418189	TNIP1	Q15025	636 aa		31.84	■■■□□ 2.69
HDAC11-209	ENST00000418189	C8orf58	Q8NAV2	365 aa		31.84	■■■□□ 2.69
HDAC11-209	ENST00000418189	RAD17	O75943	681 aa		31.83	■■■□□ 2.69
HDAC11-209	ENST00000418189	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.83	■■■□□ 2.69
HDAC11-209	ENST00000418189	CHMP4A	Q9BY43	222 aa		31.83	■■■□□ 2.69
HDAC11-209	ENST00000418189	ABT1	Q9ULW3	272 aa	Known RBP	31.82	■■■□□ 2.68
HDAC11-209	ENST00000418189	YDJC	A8MPS7	323 aa		31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	FOXN1	O15353	648 aa		31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	HSP90B1	P14625	803 aa	Known RBP	31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	MYD88	Q99836	296 aa		31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	BCL2L13	Q9BXK5	485 aa		31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.81	■■■□□ 2.68
HDAC11-209	ENST00000418189	FMR1	Q06787	632 aa	Known RBP eCLIP	31.8	■■■□□ 2.68
HDAC11-209	ENST00000418189	CCDC30	Q5VVM6	783 aa		31.8	■■■□□ 2.68
HDAC11-209	ENST00000418189	CCDC191	Q8NCU4	936 aa		31.8	■■■□□ 2.68
HDAC11-209	ENST00000418189	WASHC4	Q2M389	1173 aa		31.79	■■■□□ 2.68
HDAC11-209	ENST00000418189	AIDA	Q96BJ3	306 aa		31.79	■■■□□ 2.68
HDAC11-209	ENST00000418189	RPS8	P62241	208 aa	Known RBP	31.78	■■■□□ 2.68
HDAC11-209	ENST00000418189	THSD7B	Q9C0I4	1608 aa		31.78	■■■□□ 2.68
HDAC11-209	ENST00000418189	WDR33	Q9C0J8	1336 aa	Known RBP	31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	TRAF5	O00463	557 aa		31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	DDX58	O95786	925 aa	Known RBP	31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	PCCA	P05165	728 aa	Predicted RBP	31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	GPSM2	P81274	684 aa		31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	WBP1L	Q9NX94	342 aa		31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	POLL	Q9UGP5	575 aa		31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	PGAP2	Q9UHJ9	254 aa		31.77	■■■□□ 2.68
HDAC11-209	ENST00000418189	C6orf229	H3BNL8	230 aa		31.76	■■■□□ 2.67
HDAC11-209	ENST00000418189	METTL22	Q9BUU2	404 aa	Predicted RBP	31.76	■■■□□ 2.67
HDAC11-209	ENST00000418189	CWC25	Q9NXE8	425 aa	Predicted RBP	31.76	■■■□□ 2.67
HDAC11-209	ENST00000418189	CCDC27	Q2M243	656 aa		31.75	■■■□□ 2.67
HDAC11-209	ENST00000418189	CCDC184	Q52MB2	194 aa		31.75	■■■□□ 2.67
HDAC11-209	ENST00000418189	CST9	Q5W186	159 aa		31.75	■■■□□ 2.67
HDAC11-209	ENST00000418189	ZC3H15	Q8WU90	426 aa	Known RBP	31.75	■■■□□ 2.67
HDAC11-209	ENST00000418189	EYA3	Q99504	573 aa		31.75	■■■□□ 2.67
HDAC11-209	ENST00000418189	CTCF	P49711	727 aa	Predicted RBP	31.74	■■■□□ 2.67
HDAC11-209	ENST00000418189	TSPYL6	Q8N831	410 aa		31.74	■■■□□ 2.67
HDAC11-209	ENST00000418189	DBNDD1	Q9H9R9	158 aa		31.74	■■■□□ 2.67
HDAC11-209	ENST00000418189	PRDM10	Q9NQV6	1147 aa		31.74	■■■□□ 2.67
HDAC11-209	ENST00000418189	CNOT7	Q9UIV1	285 aa	Known RBP	31.74	■■■□□ 2.67
HDAC11-209	ENST00000418189	HIRA	P54198	1017 aa	Predicted RBP	31.73	■■■□□ 2.67
HDAC11-209	ENST00000418189	TRPM4	Q8TD43	1214 aa		31.73	■■■□□ 2.67
HDAC11-209	ENST00000418189	SEC31B	Q9NQW1	1179 aa		31.73	■■■□□ 2.67
HDAC11-209	ENST00000418189	RIMBP2	O15034	1052 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	PDE8A	O60658	829 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	CCDC152	Q4G0S7	254 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	TBC1D16	Q8TBP0	767 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	DPF2	Q92785	391 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	PODXL2	Q9NZ53	605 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189	TLL2	Q9Y6L7	1015 aa		31.72	■■■□□ 2.67
HDAC11-209	ENST00000418189		H7C1D1	291 aa		31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	PSMD14	O00487	310 aa		31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	CAPN15	O75808	1086 aa		31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	MICALL2	Q8IY33	904 aa		31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	TSR2	Q969E8	191 aa	Known RBP	31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	MAP3K2	Q9Y2U5	619 aa		31.71	■■■□□ 2.67
HDAC11-209	ENST00000418189	ECE2	O60344	883 aa		31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	ECE1	P42892	770 aa		31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	MAP2K1	Q02750	393 aa	Predicted RBP	31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	MYH3	P11055	1940 aa		31.7	■■■□□ 2.67
HDAC11-209	ENST00000418189	SHTN1	A0MZ66	631 aa		31.69	■■■□□ 2.66
HDAC11-209	ENST00000418189	KSR2	Q6VAB6	950 aa		31.69	■■■□□ 2.66
HDAC11-209	ENST00000418189	WWC1	Q8IX03	1113 aa		31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms