RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 GCKRQ14397 625 aa16.82■□□□□ 0.28
TGFBR3-203ENST00000417833 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
TGFBR3-203ENST00000417833 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
TGFBR3-203ENST00000417833 BEND3Q5T5X7 828 aa16.82■□□□□ 0.28
TGFBR3-203ENST00000417833 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
TGFBR3-203ENST00000417833 F6X3S4 739 aa16.81■□□□□ 0.28
TGFBR3-203ENST00000417833 PDE8AO60658 829 aa16.81■□□□□ 0.28
TGFBR3-203ENST00000417833 BBOX1O75936 387 aa16.81■□□□□ 0.28
TGFBR3-203ENST00000417833 NFKBIEO00221 500 aa16.8■□□□□ 0.28
TGFBR3-203ENST00000417833 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
TGFBR3-203ENST00000417833 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
TGFBR3-203ENST00000417833 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
TGFBR3-203ENST00000417833 RTKN2Q8IZC4 609 aa16.8■□□□□ 0.28
TGFBR3-203ENST00000417833 ABCC4O15439 1325 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 LMNB1P20700 586 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
TGFBR3-203ENST00000417833 CASP7P55210 303 aa16.78■□□□□ 0.28
TGFBR3-203ENST00000417833 GRAPQ13588 217 aa16.78■□□□□ 0.28
TGFBR3-203ENST00000417833 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
TGFBR3-203ENST00000417833 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
TGFBR3-203ENST00000417833 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
TGFBR3-203ENST00000417833 ZC3H4Q9UPT8 1303 aaKnown RBP16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 SP8Q8IXZ3 490 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 TAOK3Q9H2K8 898 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
TGFBR3-203ENST00000417833 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 RASSF7Q02833 373 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 CCDC152Q4G0S7 254 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 PSMD1Q99460 953 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 MYH3P11055 1940 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 RTL9Q8NET4 1388 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
TGFBR3-203ENST00000417833 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 CTSWP56202 376 aa16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
TGFBR3-203ENST00000417833 TAF1P21675 1872 aa16.74■□□□□ 0.27
TGFBR3-203ENST00000417833 GRM8O00222 908 aa16.74■□□□□ 0.27
TGFBR3-203ENST00000417833 CSF1RP07333 972 aa16.74■□□□□ 0.27
TGFBR3-203ENST00000417833 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
TGFBR3-203ENST00000417833 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
TGFBR3-203ENST00000417833 UTYO14607 1347 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 SMC1BQ8NDV3 1235 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 PCDH10Q9P2E7 1040 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
TGFBR3-203ENST00000417833 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
TGFBR3-203ENST00000417833 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
TGFBR3-203ENST00000417833 IPO8O15397 1037 aaKnown RBP16.71■□□□□ 0.27
TGFBR3-203ENST00000417833 CCT4P50991 539 aaKnown RBP16.71■□□□□ 0.27
TGFBR3-203ENST00000417833 FOXO4P98177 505 aa16.71■□□□□ 0.27
TGFBR3-203ENST00000417833 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
TGFBR3-203ENST00000417833 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
TGFBR3-203ENST00000417833 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
TGFBR3-203ENST00000417833 COL4A1P02462 1669 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 BCAR3O75815 825 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 MPNDQ8N594 471 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 GREM2Q9H772 168 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 RRAGCQ9HB90 399 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
TGFBR3-203ENST00000417833 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-203ENST00000417833 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-203ENST00000417833 ZNF277Q9NRM2 450 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-203ENST00000417833 BSDC1Q9NW68 430 aaPredicted RBP16.68■□□□□ 0.26
TGFBR3-203ENST00000417833 GLTPD2A6NH11 291 aa16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 PODXL2Q9NZ53 605 aa16.67■□□□□ 0.26
TGFBR3-203ENST00000417833 ITGA6P23229 1130 aa16.66■□□□□ 0.26
TGFBR3-203ENST00000417833 LTBP1Q14766 1721 aa16.66■□□□□ 0.26
TGFBR3-203ENST00000417833 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
TGFBR3-203ENST00000417833 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
TGFBR3-203ENST00000417833 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
TGFBR3-203ENST00000417833 FZD9O00144 591 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms