RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 PCSK7Q16549 785 aa8.4□□□□□ -1.06
PTPRK-209ENST00000415046 COX20Q5RI15 118 aa8.4□□□□□ -1.06
PTPRK-209ENST00000415046 NACC1Q96RE7 527 aa8.4□□□□□ -1.06
PTPRK-209ENST00000415046 OPLAHO14841 1288 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 EGFRP00533 1210 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
PTPRK-209ENST00000415046 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
PTPRK-209ENST00000415046 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 TRPM4Q8TD43 1214 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 NUDT8Q8WV74 236 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
PTPRK-209ENST00000415046 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
PTPRK-209ENST00000415046 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 RARAP10276 462 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 TARSP26639 723 aaKnown RBP8.38□□□□□ -1.07
PTPRK-209ENST00000415046 GPLD1P80108 840 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 DOC2BQ14184 412 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
PTPRK-209ENST00000415046 RGS9O75916 674 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-209ENST00000415046 ELNP15502 786 aa8.37□□□□□ -1.07
PTPRK-209ENST00000415046 GRIK4Q16099 956 aa8.37□□□□□ -1.07
PTPRK-209ENST00000415046 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
PTPRK-209ENST00000415046 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
PTPRK-209ENST00000415046 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-209ENST00000415046 ZBTB42B2RXF5 422 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 SASH3O75995 380 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 CPB1P15086 417 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 RAC1P63000 192 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 PERM1Q5SV97 790 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 C16orf46Q6P387 395 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 SAP130Q9H0E3 1048 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
PTPRK-209ENST00000415046 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 XYLBO75191 536 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 ITGB7P26010 798 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 NRLP54845 237 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
PTPRK-209ENST00000415046 C9orf172C9J069 976 aa8.34□□□□□ -1.07
PTPRK-209ENST00000415046 SELPP16109 830 aa8.34□□□□□ -1.07
PTPRK-209ENST00000415046 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 GRIK5Q16478 980 aa8.34□□□□□ -1.07
PTPRK-209ENST00000415046 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 TTC9Q92623 222 aa8.34□□□□□ -1.07
PTPRK-209ENST00000415046 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
PTPRK-209ENST00000415046 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
PTPRK-209ENST00000415046 TNFRSF10BO14763 440 aa8.33□□□□□ -1.08
PTPRK-209ENST00000415046 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
PTPRK-209ENST00000415046 HOXD8P13378 290 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-209ENST00000415046 BRD2P25440 801 aaKnown RBP8.33□□□□□ -1.08
PTPRK-209ENST00000415046 RSPO4Q2I0M5 234 aaPredicted RBP8.33□□□□□ -1.08
PTPRK-209ENST00000415046 MSL1Q68DK7 614 aa8.33□□□□□ -1.08
PTPRK-209ENST00000415046 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
PTPRK-209ENST00000415046 MKNK1Q9BUB5 465 aa8.33□□□□□ -1.08
PTPRK-209ENST00000415046 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
PTPRK-209ENST00000415046 PLAURQ03405 335 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 ADGRE1Q14246 886 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 MBTPS1Q14703 1052 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 CAPN12Q6ZSI9 719 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-209ENST00000415046 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-209ENST00000415046 SEMA6BQ9H3T3 888 aa8.32□□□□□ -1.08
PTPRK-209ENST00000415046 SOX18P35713 384 aa8.31□□□□□ -1.08
PTPRK-209ENST00000415046 MMP20O60882 483 aa8.3□□□□□ -1.08
PTPRK-209ENST00000415046 PSAPP07602 524 aa8.3□□□□□ -1.08
PTPRK-209ENST00000415046 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-209ENST00000415046 TRIP4Q15650 581 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-209ENST00000415046 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
PTPRK-209ENST00000415046 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
PTPRK-209ENST00000415046 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
PTPRK-209ENST00000415046 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
PTPRK-209ENST00000415046 HFE2Q6ZVN8 426 aa8.29□□□□□ -1.08
PTPRK-209ENST00000415046 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
PTPRK-209ENST00000415046 WFDC8Q8IUA0 241 aa8.29□□□□□ -1.08
PTPRK-209ENST00000415046 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 DYRK3O43781 588 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 SIK1P57059 783 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-209ENST00000415046 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
PTPRK-209ENST00000415046 XP32Q5T750 250 aa8.27□□□□□ -1.09
PTPRK-209ENST00000415046 PIK3R5Q8WYR1 880 aa8.27□□□□□ -1.09
PTPRK-209ENST00000415046 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
PTPRK-209ENST00000415046 NSUN5Q96P11 429 aaKnown RBP8.27□□□□□ -1.09
PTPRK-209ENST00000415046 STIM2Q9P246 746 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms